ID A0A0D3BN38_BRAOL Unreviewed; 456 AA.
AC A0A0D3BN38;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
GN Name=106336134 {ECO:0000313|EnsemblPlants:Bo3g184730.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g184730.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo3g184730.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo3g184730.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013630324.1; XM_013774870.1.
DR AlphaFoldDB; A0A0D3BN38; -.
DR STRING; 109376.A0A0D3BN38; -.
DR EnsemblPlants; Bo3g184730.1; Bo3g184730.1; Bo3g184730.
DR GeneID; 106336134; -.
DR Gramene; Bo3g184730.1; Bo3g184730.1; Bo3g184730.
DR KEGG; boe:106336134; -.
DR eggNOG; KOG1721; Eukaryota.
DR HOGENOM; CLU_014578_4_1_1; -.
DR OMA; AMPASIN; -.
DR OrthoDB; 5363046at2759; -.
DR Proteomes; UP000032141; Chromosome C3.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 2.
DR InterPro; IPR031140; IDD1-16.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR10593:SF238; PROTEIN INDETERMINATE-DOMAIN 7; 1.
DR PANTHER; PTHR10593; SERINE/THREONINE-PROTEIN KINASE RIO; 1.
DR Pfam; PF12874; zf-met; 1.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 97..119
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 16..81
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 253..295
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 330..350
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 16..72
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 253..268
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 269..285
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 456 AA; 51243 MW; 4D9888EBEC54DC96 CRC64;
MMMNKDMLYH HQQQQVEENM SNLTSASGDR ASVSSGNRTE TSGSNFHYNT NPNQQQEEQC
LAPQPSQKKK RNQPGNPDPE AEVLALSPKT LMATNRFICE ICNKGFQRDQ NLQLHKRGHN
LPWKLKQRSN KDVIRKKVYV CPEPNCVHHH PSRALGDLTG IKKHFFRKHG EKKWKCDKCS
KKYAVQSDWK AHAKTCGTKE YKCDCGTLFS RRDSFITHRA FCDALAEESA RAIPNPILIP
SSSPHQTQHN INFSSSSQNI TSHNNNPHGH DELPMKQEEP HHHFHNIPPW LISSNPNPNG
NNANYFPLAS ASANFQHPSP AMSATALLQK AAQMGPSKST TTPEEDEKSS YNKLITTTMA
ASMMTSPSEP GFGFQDYYMM NHHAHHHDGV GEAFDGGFNA GDERNDVVDD SGGETRDFLG
LRPLMSHNEM LSFANNLGNC INTSASEQQQ RYSHQD
//
