ID A0A0D3BY16_BRAOL Unreviewed; 671 AA.
AC A0A0D3BY16;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=SMC hinge domain-containing protein {ECO:0000259|SMART:SM00968};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo4g119760.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo4g119760.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo4g119760.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; A0A0D3BY16; -.
DR STRING; 109376.A0A0D3BY16; -.
DR EnsemblPlants; Bo4g119760.1; Bo4g119760.1; Bo4g119760.
DR Gramene; Bo4g119760.1; Bo4g119760.1; Bo4g119760.
DR eggNOG; KOG0018; Eukaryota.
DR HOGENOM; CLU_001042_0_4_1; -.
DR OMA; TEQCELE; -.
DR Proteomes; UP000032141; Chromosome C4.
DR GO; GO:0005694; C:chromosome; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0051276; P:chromosome organization; IEA:InterPro.
DR Gene3D; 1.20.1060.20; -; 1.
DR Gene3D; 3.30.70.1620; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003395; RecF/RecN/SMC_N.
DR InterPro; IPR010935; SMC_hinge.
DR InterPro; IPR036277; SMC_hinge_sf.
DR PANTHER; PTHR18937:SF12; STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN; 1.
DR PANTHER; PTHR18937; STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; 1.
DR Pfam; PF06470; SMC_hinge; 1.
DR Pfam; PF02463; SMC_N; 1.
DR SMART; SM00968; SMC_hinge; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF75553; Smc hinge domain; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 2..125
FT /note="SMC hinge"
FT /evidence="ECO:0000259|SMART:SM00968"
FT COILED 172..227
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 259..354
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 671 AA; 77411 MW; 6AF4B58A2FC2A50A CRC64;
MTDLCRPNRK KYNLAVTVAM GRFMDAVVVE DENTGKDCIK YLKEQRLPPM TFIPLQSVRV
KPVLERSRNL GGTAKLALDV IQYPLWFMFL NLNHATFDPE LEKAVLFAVG NTLVCDDLEE
AKSNKWDDKK IKGLVKKKEE CEQELENIGS IREMQIKESE ISGKISGIEK KIQYAEIEKK
SIKDKLPDLE QDKRNITEES RRINLELSKS RAEVDKRNAE IRKLEKIINE IVDGIYKDFS
QSVGVANIRE YEEKQLKEAQ EVAEERLNLS NQLAKLKYQV EYEQNRDVGS RIRKLESSVS
SLEADLEKIQ KRKSELKELT EKATNEINNW KKEMLECKQK SEEYEKEILD WKKQVSQVTT
SITKLSRQIL SKETQIGQLI SQKQEITEQC ELERITLPVL SDAAEEDDSA GPQFDFSELD
RVYLKERRPS ARDKIDAEFR QKIESETSEV ERTAPNLRAL DQYEAIQEKE RQVSQEFEAA
RKEEKQMADA YNVVKQKSYL WEAFNHISSI IDKIYKQLTK SNTHQMGGTA YLNLENEDDP
FLHGIKYTTM SPTKRFRDME KLSGGEKTVA ALALLFSIHS YRPSPFFILD EVDAALDNLN
VAKVAQFIRT RSCQAACDNQ EAKDGNGFQS IVISLKDSFY DKAEALVGVY RDVEKSCSTT
MSFDLRNYQE S
//