ID A0A0D3C7H6_BRAOL Unreviewed; 1068 AA.
AC A0A0D3C7H6;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE RecName: Full=MATH domain-containing protein {ECO:0000259|PROSITE:PS50144};
GN Name=106294935 {ECO:0000313|EnsemblPlants:Bo5g004450.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo5g004450.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo5g004450.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo5g004450.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013586099.1; XM_013730645.1.
DR AlphaFoldDB; A0A0D3C7H6; -.
DR STRING; 109376.A0A0D3C7H6; -.
DR EnsemblPlants; Bo5g004450.1; Bo5g004450.1; Bo5g004450.
DR GeneID; 106294935; -.
DR Gramene; Bo5g004450.1; Bo5g004450.1; Bo5g004450.
DR KEGG; boe:106294935; -.
DR eggNOG; ENOG502QW6P; Eukaryota.
DR HOGENOM; CLU_005068_0_0_1; -.
DR OMA; GTESKSH; -.
DR OrthoDB; 9211at2759; -.
DR Proteomes; UP000032141; Chromosome C5.
DR CDD; cd00121; MATH; 1.
DR InterPro; IPR002083; MATH/TRAF_dom.
DR InterPro; IPR008974; TRAF-like.
DR PANTHER; PTHR47477:SF15; MATH DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47477; TNF RECEPTOR-ASSOCIATED FACTOR HOMOLOG 1A; 1.
DR Pfam; PF00917; MATH; 1.
DR SMART; SM00061; MATH; 1.
DR SUPFAM; SSF49599; TRAF domain-like; 1.
DR PROSITE; PS50144; MATH; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 64..187
FT /note="MATH"
FT /evidence="ECO:0000259|PROSITE:PS50144"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 30..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 348..375
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 429..668
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 688..819
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 30..45
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 429..444
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 458..494
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 519..534
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 535..656
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 692..722
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 729..777
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 788..819
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1068 AA; 118397 MW; 11147DEF659046C3 CRC64;
MAETVPEVSG VSSNGHHSVS GGEALSVWRS SGQVENGTPS TSPSYWDTDD DDDEDYGLKP
SQLFGKHTWK IAKFSEINKR ELRSSVFDAG GYKWYILIYP QGCDVCNHLS LFLCVANHEK
LLPGWSHFAQ FTIAVVNKDS KKSKFSDTLH RFWKKEHDWG WKKFMELPKL HEGFIDDSDS
LTIEAQVQVI RERVDRPFRC LHCGYRRELV RVYFNNVEQH CRRFVEEKRS KLGRLIEDKA
RWTSFGVFWL GMDQNCRRRM SREKMDVILK GVVKHFFIEK EVTSTLVMDS LYSGLKALQG
QAKNKKARPS LLDAKELPAP IVSVDKDMFV LVDDVLLLLE RAALEPLPTH EDKSPQNRTK
DANDGEEVNN EVVERDERRL TELGRRTVEI FVLTHIFSSK IEVAYQEAVA LKRQEELIRE
EEEAWLAETE QRAKRGAAER EKKSKKKQAK QKRNKNKGKD KRKEEKVTVV THEKDLKENQ
HDEEEKDSVT EKAQSSAEKT DILGDVSDDV SDSVDGSVDI LHPDLEDGDS SSVHWETDTL
ETYPPPSGGS DISISTPNGI GERKNQSTVD DSSSTCSNDS IRSGVNSGSY KGNALIRNQK
SPNKGTNHQV KMISVARSLA SETDNQPSTL GTESKSHSSP SESDWVVVSR IQEPESSRNR
SPVRKERNVA QIIVNSVDMD RLKVKSAAVL SSPRTAAKNP SPPLTQTKPE KKSVSSNADA
VPNRKVISAP GPPSSSQVVR PSSDIQSQTV GLRADTQKIS SPKQSATTTT ISRPSSAPVI
PAMQPHPIIA SSSVQSTSSS LPRSVSSAGR LGPDTSVHNQ QSFIPQSYKH AIVGNTPGST
SSFIHHPSAH GVVPTTLPSS SYSQTPTLSH QSSFPFSQDA LMWAGRSSNS VSMGMSNPYT
PAVTSNRSIS HIDAEIARQQ QPQSLMTDEF PHLDIINDLL EDENCSNMAF NGNIYNSQPQ
LFNSQYAYHG GGGGADLGMS GEFISSGRSR SFGEEGFHYM PRVSASVPYG GDGLMPTQWQ
MGSVDLSLLA MRNSNLEGTT PTYHHHTYSS FSPGINGYTE YRPSSNGH
//