ID A0A0D3C8W6_BRAOL Unreviewed; 590 AA.
AC A0A0D3C8W6;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=106294703 {ECO:0000313|EnsemblPlants:Bo5g010340.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo5g010340.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo5g010340.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo5g010340.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR RefSeq; XP_013585784.1; XM_013730330.1.
DR AlphaFoldDB; A0A0D3C8W6; -.
DR EnsemblPlants; Bo5g010340.1; Bo5g010340.1; Bo5g010340.
DR GeneID; 106294703; -.
DR Gramene; Bo5g010340.1; Bo5g010340.1; Bo5g010340.
DR KEGG; boe:106294703; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR OMA; FHREYSK; -.
DR OrthoDB; 368163at2759; -.
DR Proteomes; UP000032141; Chromosome C5.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 12.
DR PANTHER; PTHR45613:SF476; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 12.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 125..159
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 160..190
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 192..226
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 227..261
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 262..296
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 297..331
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 332..366
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 367..401
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 402..436
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 437..471
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 472..506
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 507..541
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 590 AA; 65304 MW; 0C07AE0972C3A8AD CRC64;
MDLMVSTSSV QEGLSLIQQF HREYSKLDVL GRTSRNVNSR LSLGSRKRNR LVLASAASGL
NGRAQKFETL ASGVNGNGHY SSPNSPFALE DAESNNHLRQ LVRAGELEEG FKFLENMVYH
GNVPDIIPCT TLIRGFCRMG KTKRAAKILD ILEGSGAVPD VITYNVMISG YCKAGEINSA
LSLLDRMSVS PDVVTYNTIL RSLCDSGKLK QAMEVLHRQL KRDCYPDVIT YTILIEATCK
ESGVGEAMKL LDEMRVKGCT PDVVTYNVLV NGICKEGRLD EAIKFLNDMP SYGCQPNVIT
HNIILRSMCS TGRWMDAEKL LADMLRKGFS PSVVTFNILI NFLCRKGLLG RAIDILEKMP
KHGCQPNSLS YNPLLHGFCK EKKMDRAIEY LERMVSRGCY PDIVTYNTML TALCKDGKVE
DAVEILNQLS SKGCSPVLIT YNTVIDGLAK AGKTGKAIKL LDEMRAKDLR PDTITYSSLV
GGLSREGKVD EAIKFFHEFE RMGVRPNAVT FNSIMLGLCK TRQTDRAIDF LVYMINRGCK
PTETSYTILI EGIAYEGMAK EALELLSVLC NKGLMKRSSA EQVAGKCSSK
//
