ID A0A0D3CA49_BRAOL Unreviewed; 1051 AA.
AC A0A0D3CA49;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=AAA+ ATPase domain-containing protein {ECO:0000259|SMART:SM00382};
GN Name=106295923 {ECO:0000313|EnsemblPlants:Bo5g019630.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo5g019630.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo5g019630.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo5g019630.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the DnaX/STICHEL family.
CC {ECO:0000256|ARBA:ARBA00006360}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR RefSeq; XP_013587391.1; XM_013731937.1.
DR AlphaFoldDB; A0A0D3CA49; -.
DR STRING; 109376.A0A0D3CA49; -.
DR EnsemblPlants; Bo5g019630.1; Bo5g019630.1; Bo5g019630.
DR GeneID; 106295923; -.
DR Gramene; Bo5g019630.1; Bo5g019630.1; Bo5g019630.
DR KEGG; boe:106295923; -.
DR eggNOG; KOG0989; Eukaryota.
DR HOGENOM; CLU_009072_0_0_1; -.
DR OMA; WSTSCKS; -.
DR OrthoDB; 3675885at2759; -.
DR Proteomes; UP000032141; Chromosome C5.
DR GO; GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd18137; HLD_clamp_pol_III_gamma_tau; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.20.272.10; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR008921; DNA_pol3_clamp-load_cplx_C.
DR InterPro; IPR022754; DNA_pol_III_gamma-3.
DR InterPro; IPR012763; DNA_pol_III_sug/sutau_N.
DR InterPro; IPR045085; HLD_clamp_pol_III_gamma_tau.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR02397; dnaX_nterm; 1.
DR PANTHER; PTHR11669:SF67; PROTEIN STICHEL-LIKE 1; 1.
DR PANTHER; PTHR11669; REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT; 1.
DR Pfam; PF13177; DNA_pol3_delta2; 1.
DR Pfam; PF12169; DNA_pol3_gamma3; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF48019; post-AAA+ oligomerization domain-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 386..533
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT REGION 28..60
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 90..154
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 332..353
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 710..733
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 876..895
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 913..950
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 29..50
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 118..134
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 332..346
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 710..732
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1051 AA; 117739 MW; 1C1AAE37C724F854 CRC64;
MSSLKISDPS KLHLKKELTQ IRKVSKCLRD PGTSSSWKSP LTSSRSVPVE PPSNKDAELL
NQLDSQFRVE SSRGKEKEKK VFLYNWKSQK TSSDNDDDDD ASDARNGGDS TMFRCRDKNR
FTKKKRRFLS RYPHHHHQPK EATSGEETED FSNSESLGKL TQMLKLKHKN WSRSSSYKFL
RATSKRDSSS YTCNSTPALS TSSYNNLYAI RSPSTVESFD DDNNLDVTGR QQGCGIPFYR
THKRNLKHRG GCRSCCSPSF SDTLRRKGST ILCGGSRQYM HRHSSGRCNK KLSVVPLLKY
RGDSTRGGRS SLGSDDDFGE LDLESQSRLD GRRWSTSCKS HGEEEGSSPE NTQSLSIKYK
PMFFDELVGQ SVVVQSLMNA LKKGRVAGVY LFQGPRGTGK TSTARIFSAA LNCDALANEE
MKPCGYCKEC SEFMSGKSKD LLELDASKEN GGERVSYVLK NLMSLAPPQS SPRYKVFVID
ECHLLPSKTW LLLLKFLEKP LQRVVFICVT TELGNVPRTI QSRCQKLLFN KLKDGDIVVR
LRKIASDENL DVESQALSLI ALNADGSLRD AETMLDQLSL MGKRITVDLV NELVGVVSDE
NLLELLELAL ASDTAETVKK ARELLDLGAD PILMMSQLAS LIMDIIAGAY KALDEKYSDA
FLDGRNLSEP EMERLKHALK ILSEAEKQLR VTTDRSTWFI ATLLQLGLMP SPGSTHSSSS
RRQSSIATEE HPSSISREVI AYKQRSSLQC NNSASPTSIR KGETTVHEVT SFSSSSEVLE
NDASISEKLN DIWMKCVDRC HSKTLKQLLY SHGKLLSISE VKGTLVAYIA FGDREIKLRA
EGFVRSITNS IETVLRRNVE VRMILLSETE LLSSKQTRQT AVADSSDTES GHEVPMKRIE
TIIQEQRLET ERLQKTPGSQ GLLKPERNQV SPQEDTSYHH HQPNIGSAVS SGLNNEVLKI
CKMDEVQENQ TCKRMEHCPV SPSILHDSNF TNNKDNLGYE SVSGRGVCSL LFCWKTQKSP
RITKIKGTSV RSRRSRKRRF LLFSGCAKTR K
//