ID A0A0D3CCL3_BRAOL Unreviewed; 742 AA.
AC A0A0D3CCL3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=106295773 {ECO:0000313|EnsemblPlants:Bo5g039160.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo5g039160.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo5g039160.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo5g039160.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR RefSeq; XP_013587203.1; XM_013731749.1.
DR AlphaFoldDB; A0A0D3CCL3; -.
DR EnsemblPlants; Bo5g039160.1; Bo5g039160.1; Bo5g039160.
DR GeneID; 106295773; -.
DR Gramene; Bo5g039160.1; Bo5g039160.1; Bo5g039160.
DR KEGG; boe:106295773; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR OMA; FAYTTRI; -.
DR OrthoDB; 1205946at2759; -.
DR Proteomes; UP000032141; Chromosome C5.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 12.
DR PANTHER; PTHR47942:SF14; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47942; TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 7.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 12.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 192..226
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 261..295
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 296..330
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 331..365
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 397..431
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 432..466
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 467..501
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 538..572
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 573..607
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 608..642
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 643..677
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 678..712
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 742 AA; 85463 MW; 9730AE2340741B44 CRC64;
MILCLRLCRR ASRSSFSTST STSTSVSKLR YLFLSSSPPS NPESHYAHLI LTSHGYNPNR
KWSSHQFHPL VTDPDLLIRV LNMIREKPEI AFHFFKWLQS QRDLKQSFLA FAALLEILVE
NDLMSKASWV AERSIDLGMH EIYHLLIEKS LVDKLIACKT LDLLLWVYTK KSMVKHCLLC
FEKMITKGFS PSVRICNLVL RLLRDKQMVN EAQEVYRTMV AHGIKPTVVT VNTMLDTCFK
AGDLLKVPEI VSEMEREVVP NVITFNTMLD SCFKAGDLHK VAKLLSEMER RNVYATEVTY
NILINGFSKN GKMEEARRCH GDMRTSGFPV TTYSFNPLIE GYCKQGLFDE AWEVVELMLN
AGVSPTASTY NIYIRALCEF RRTDDARRVL LGMAAPDVVS YNTLMHGYVK LRKIREAFLL
FGELIVRNIR PSVVTYNTLM DGLCESGDLV TAQRLKAEMS RQRIDPDVKT YTTLVKGFVK
KGNLSMATAT YDEMLEKGIK PDRYACTTRL VGELQLGDKD KAFRLQEEMV AKDHNARDLI
SYNVCIDGLC KVGDLERAIE FQRKIFRDSL VPDHVTYTTV IRAYLEKGRF KMAKVLYQEM
LRKKLSPSVV TYFVLIHGHA KVGRLQQAFQ YSGEMEKRDI RPNVMTCNAL LHGICKAGEI
DEAYRYFRKM EEDGIPPNKY SYTMLINKNS DLGKWEEVVE LYREMLDKEI EPDAYTRWAL
FKHLDKDHAS REVEFLEKIL RS
//
