ID A0A0D3CGA3_BRAOL Unreviewed; 139 AA.
AC A0A0D3CGA3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=BED-type domain-containing protein {ECO:0000259|Pfam:PF02892};
GN Name=106293025 {ECO:0000313|EnsemblPlants:Bo5g083750.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo5g083750.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo5g083750.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo5g083750.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013584147.1; XM_013728693.1.
DR RefSeq; XP_013584148.1; XM_013728694.1.
DR RefSeq; XP_013584149.1; XM_013728695.1.
DR AlphaFoldDB; A0A0D3CGA3; -.
DR STRING; 109376.A0A0D3CGA3; -.
DR EnsemblPlants; Bo5g083750.1; Bo5g083750.1; Bo5g083750.
DR GeneID; 106293025; -.
DR Gramene; Bo5g083750.1; Bo5g083750.1; Bo5g083750.
DR KEGG; boe:106293025; -.
DR eggNOG; KOG1121; Eukaryota.
DR HOGENOM; CLU_1847912_0_0_1; -.
DR OrthoDB; 1132873at2759; -.
DR Proteomes; UP000032141; Chromosome C5.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR003656; Znf_BED.
DR Pfam; PF02892; zf-BED; 1.
DR SMART; SM00614; ZnF_BED; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 4..45
FT /note="BED-type"
FT /evidence="ECO:0000259|Pfam:PF02892"
FT REGION 51..79
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 53..77
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 139 AA; 15466 MW; 221567043033C832 CRC64;
MTSVFLKYFE TAPDSKTRKC KLCGQSYSIA TATGNPGRHL NNRHRGYDMA SDVATTSVPQ
TPQVAAKPSQ SHSKPPQIDY DHLNWRKERT DLQRSAGGNL ATRDYTAGVG KITEAHSDFV
MGFISVNPAS WEWEMCSRL
//
