ID A0A0D3CMS7_BRAOL Unreviewed; 663 AA.
AC A0A0D3CMS7;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=Zinc finger PHD-type domain-containing protein {ECO:0000259|SMART:SM00249};
GN Name=106293210 {ECO:0000313|EnsemblPlants:Bo5g148070.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo5g148070.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo5g148070.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo5g148070.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013584319.1; XM_013728865.1.
DR AlphaFoldDB; A0A0D3CMS7; -.
DR EnsemblPlants; Bo5g148070.1; Bo5g148070.1; Bo5g148070.
DR GeneID; 106293210; -.
DR Gramene; Bo5g148070.1; Bo5g148070.1; Bo5g148070.
DR KEGG; boe:106293210; -.
DR eggNOG; ENOG502RANS; Eukaryota.
DR HOGENOM; CLU_014776_3_0_1; -.
DR OMA; FHVDCVH; -.
DR OrthoDB; 588155at2759; -.
DR Proteomes; UP000032141; Chromosome C5.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR046349; C1-like_sf.
DR InterPro; IPR004146; DC1.
DR InterPro; IPR001965; Znf_PHD.
DR PANTHER; PTHR32410; CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN; 1.
DR PANTHER; PTHR32410:SF163; DC1 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF03107; C1_2; 8.
DR SMART; SM00249; PHD; 4.
DR SUPFAM; SSF57889; Cysteine-rich domain; 6.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 144..223
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 259..319
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 406..461
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 511..571
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
SQ SEQUENCE 663 AA; 75715 MW; E0DAA781E53554B3 CRC64;
MDTTRTIYKL PIHEHPLFLS AQFVSVPCDG CHVKGNKYGC YKCSEASCNC WFHKECAEAP
PEINHHPSHP EHPLFLTNHS PTRDDTPCEA CGQKILSPCY TCLTCEFKVD LICGIKPLPS
AIEYPVSHDH PLALFKKREE DKGPCEVCKE SIGGPFYSCL ECNNIFFHVD CVHLSKEVNL
PCHSTHPLKI ITPESLIDDD AERKCHVCVI QPENMLYHCS LCNFTLCLGC TKLPPPLVVD
HTNTHTHPLR LFSSKIAFAC NVCGVLGYDN MLYLCLKCDF LVHINCVGLP QVININRHDH
RISFTHHLGH GRAHCGVCRQ SVKQYYGAYA CSICPNYAVH SQCAVDLTVW DGLELEGIPD
ISEDIAPFKV LGDNLICHFS HRGHNLLLVK DYVTVRDYYE WFRCDACICP IEFGPFYICP
ICPFFLHAKC ANLPTKKKLV FDPTPYKLEY LGVYLYCNLC KMISCGFVYI SQGFIKNYHY
VDIHCGSISE PFVHNGHFHP LFFVTTKKDR HCNACKRVPD GYMLTCGACG FYLCLYCATL
PEKIWHMSDE HPLILYYGEK ANGKNWCEVC EMELDPSIWF FTCYEDCEVA LHVQCALGDF
SRLKPNWRFI NKERIYKVVF NNHSSRPLCS NCHDRCKIPH ILKEDDEQKN GYICSMSCLK
GLE
//
