ID A0A0D3D1H2_BRAOL Unreviewed; 559 AA.
AC A0A0D3D1H2;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE RecName: Full=TrmE-type G domain-containing protein {ECO:0000259|PROSITE:PS51709};
GN Name=106296443 {ECO:0000313|EnsemblPlants:Bo6g121670.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo6g121670.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo6g121670.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo6g121670.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like
CC GTPase superfamily. TrmE GTPase family. {ECO:0000256|ARBA:ARBA00011043,
CC ECO:0000256|RuleBase:RU003313}.
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DR RefSeq; XP_013588029.1; XM_013732575.1.
DR AlphaFoldDB; A0A0D3D1H2; -.
DR STRING; 109376.A0A0D3D1H2; -.
DR EnsemblPlants; Bo6g121670.1; Bo6g121670.1; Bo6g121670.
DR GeneID; 106296443; -.
DR Gramene; Bo6g121670.1; Bo6g121670.1; Bo6g121670.
DR KEGG; boe:106296443; -.
DR eggNOG; KOG1191; Eukaryota.
DR HOGENOM; CLU_019624_4_2_1; -.
DR OMA; LIRCAAH; -.
DR OrthoDB; 5478664at2759; -.
DR Proteomes; UP000032141; Chromosome C6.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0006400; P:tRNA modification; IEA:InterPro.
DR CDD; cd04164; trmE; 1.
DR CDD; cd14858; TrmE_N; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.20.120.430; tRNA modification GTPase MnmE domain 2; 1.
DR HAMAP; MF_00379; GTPase_MnmE; 1.
DR InterPro; IPR031168; G_TrmE.
DR InterPro; IPR006073; GTP-bd.
DR InterPro; IPR018948; GTP-bd_TrmE_N.
DR InterPro; IPR004520; GTPase_MnmE.
DR InterPro; IPR027368; MnmE_dom2.
DR InterPro; IPR025867; MnmE_helical.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR027266; TrmE/GcvT_dom1.
DR NCBIfam; TIGR00450; mnmE_trmE_thdF; 1.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR42714; TRNA MODIFICATION GTPASE GTPBP3; 1.
DR PANTHER; PTHR42714:SF2; TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIAL; 1.
DR Pfam; PF01926; MMR_HSR1; 1.
DR Pfam; PF12631; MnmE_helical; 1.
DR Pfam; PF10396; TrmE_N; 1.
DR PRINTS; PR00449; RASTRNSFRMNG.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51709; G_TRME; 1.
PE 3: Inferred from homology;
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134, ECO:0000256|RuleBase:RU003313};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU003313};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694,
KW ECO:0000256|RuleBase:RU003313}.
FT DOMAIN 318..480
FT /note="TrmE-type G"
FT /evidence="ECO:0000259|PROSITE:PS51709"
SQ SEQUENCE 559 AA; 61150 MW; 5B1249BD73CA749B CRC64;
MELLLSFRSA GVHLLRHAAP IITRANRITK PTSKNLTFLL FSSSSAKTPL LKPRATSEKG
SFVFKGDERM RGPLSSNNAF DNQFQSSSTI AAIVTPVGGP PGAVGIVRLS GDKAVEVAGR
VFRSAKRRRR KEEEESDCSE DSWRPRSHFV EYGVVVDSKG SVVDEVLAVP MLAPRSYTRE
DVVELQCHGS EVCLRRVLRA CVDAGARLAE PGEFTLRAFL NGRLDLTQAE NVEKLISAKS
SAAADAALEG IQGGFSSLVK SLRAQCIELL TEIEARLDFD DEMPPLDTDL VISKINKMSE
DVESALDTAN YDKLLQTGLQ VAIIGRPNVG KSSLLNAWSK SERAIVTEVA GTTRDVVEAS
VTLRGVPVTL LDTAGIRETK DIVEKIGVER SETAAKLADV IIMAVNAVEG WTEEDTELLH
KIQSDKPMIL VMNKIDSATP DTCEQLEDKK EEAFHRSVFT SAVTGQGIEE LEEAILEILG
LDRVPSGGHQ WTVNQRQCEQ LVRTKEALER LREAIKDELP IDLWTIELRE AALALAQISG
QDVSEEVLSS IFAKFCIGK
//