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Database: UniProt
Entry: A0A0D3D1H2_BRAOL
LinkDB: A0A0D3D1H2_BRAOL
Original site: A0A0D3D1H2_BRAOL 
ID   A0A0D3D1H2_BRAOL        Unreviewed;       559 AA.
AC   A0A0D3D1H2;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 43.
DE   RecName: Full=TrmE-type G domain-containing protein {ECO:0000259|PROSITE:PS51709};
GN   Name=106296443 {ECO:0000313|EnsemblPlants:Bo6g121670.1};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo6g121670.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo6g121670.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo6g121670.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like
CC       GTPase superfamily. TrmE GTPase family. {ECO:0000256|ARBA:ARBA00011043,
CC       ECO:0000256|RuleBase:RU003313}.
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DR   RefSeq; XP_013588029.1; XM_013732575.1.
DR   AlphaFoldDB; A0A0D3D1H2; -.
DR   STRING; 109376.A0A0D3D1H2; -.
DR   EnsemblPlants; Bo6g121670.1; Bo6g121670.1; Bo6g121670.
DR   GeneID; 106296443; -.
DR   Gramene; Bo6g121670.1; Bo6g121670.1; Bo6g121670.
DR   KEGG; boe:106296443; -.
DR   eggNOG; KOG1191; Eukaryota.
DR   HOGENOM; CLU_019624_4_2_1; -.
DR   OMA; LIRCAAH; -.
DR   OrthoDB; 5478664at2759; -.
DR   Proteomes; UP000032141; Chromosome C6.
DR   GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR   GO; GO:0006400; P:tRNA modification; IEA:InterPro.
DR   CDD; cd04164; trmE; 1.
DR   CDD; cd14858; TrmE_N; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 1.20.120.430; tRNA modification GTPase MnmE domain 2; 1.
DR   HAMAP; MF_00379; GTPase_MnmE; 1.
DR   InterPro; IPR031168; G_TrmE.
DR   InterPro; IPR006073; GTP-bd.
DR   InterPro; IPR018948; GTP-bd_TrmE_N.
DR   InterPro; IPR004520; GTPase_MnmE.
DR   InterPro; IPR027368; MnmE_dom2.
DR   InterPro; IPR025867; MnmE_helical.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR005225; Small_GTP-bd_dom.
DR   InterPro; IPR027266; TrmE/GcvT_dom1.
DR   NCBIfam; TIGR00450; mnmE_trmE_thdF; 1.
DR   NCBIfam; TIGR00231; small_GTP; 1.
DR   PANTHER; PTHR42714; TRNA MODIFICATION GTPASE GTPBP3; 1.
DR   PANTHER; PTHR42714:SF2; TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIAL; 1.
DR   Pfam; PF01926; MMR_HSR1; 1.
DR   Pfam; PF12631; MnmE_helical; 1.
DR   Pfam; PF10396; TrmE_N; 1.
DR   PRINTS; PR00449; RASTRNSFRMNG.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS51709; G_TRME; 1.
PE   3: Inferred from homology;
KW   GTP-binding {ECO:0000256|ARBA:ARBA00023134, ECO:0000256|RuleBase:RU003313};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU003313};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   tRNA processing {ECO:0000256|ARBA:ARBA00022694,
KW   ECO:0000256|RuleBase:RU003313}.
FT   DOMAIN          318..480
FT                   /note="TrmE-type G"
FT                   /evidence="ECO:0000259|PROSITE:PS51709"
SQ   SEQUENCE   559 AA;  61150 MW;  5B1249BD73CA749B CRC64;
     MELLLSFRSA GVHLLRHAAP IITRANRITK PTSKNLTFLL FSSSSAKTPL LKPRATSEKG
     SFVFKGDERM RGPLSSNNAF DNQFQSSSTI AAIVTPVGGP PGAVGIVRLS GDKAVEVAGR
     VFRSAKRRRR KEEEESDCSE DSWRPRSHFV EYGVVVDSKG SVVDEVLAVP MLAPRSYTRE
     DVVELQCHGS EVCLRRVLRA CVDAGARLAE PGEFTLRAFL NGRLDLTQAE NVEKLISAKS
     SAAADAALEG IQGGFSSLVK SLRAQCIELL TEIEARLDFD DEMPPLDTDL VISKINKMSE
     DVESALDTAN YDKLLQTGLQ VAIIGRPNVG KSSLLNAWSK SERAIVTEVA GTTRDVVEAS
     VTLRGVPVTL LDTAGIRETK DIVEKIGVER SETAAKLADV IIMAVNAVEG WTEEDTELLH
     KIQSDKPMIL VMNKIDSATP DTCEQLEDKK EEAFHRSVFT SAVTGQGIEE LEEAILEILG
     LDRVPSGGHQ WTVNQRQCEQ LVRTKEALER LREAIKDELP IDLWTIELRE AALALAQISG
     QDVSEEVLSS IFAKFCIGK
//
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