ID A0A0D3D385_BRAOL Unreviewed; 483 AA.
AC A0A0D3D385;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=MYND-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=106303657 {ECO:0000313|EnsemblPlants:Bo7g012860.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo7g012860.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo7g012860.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo7g012860.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013595408.1; XM_013739954.1.
DR AlphaFoldDB; A0A0D3D385; -.
DR STRING; 109376.A0A0D3D385; -.
DR EnsemblPlants; Bo7g012860.1; Bo7g012860.1; Bo7g012860.
DR GeneID; 106303657; -.
DR Gramene; Bo7g012860.1; Bo7g012860.1; Bo7g012860.
DR KEGG; boe:106303657; -.
DR eggNOG; KOG2084; Eukaryota.
DR HOGENOM; CLU_018406_2_0_1; -.
DR OMA; LHMKLGK; -.
DR OrthoDB; 166337at2759; -.
DR Proteomes; UP000032141; Chromosome C7.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.220.160; -; 1.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 2.170.270.10; SET domain; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR12197:SF285; HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1; 1.
DR PANTHER; PTHR12197; HISTONE-LYSINE N-METHYLTRANSFERASE SMYD; 1.
DR Pfam; PF00856; SET; 1.
DR Pfam; PF01753; zf-MYND; 1.
DR SMART; SM00317; SET; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR PROSITE; PS50280; SET; 1.
DR PROSITE; PS01360; ZF_MYND_1; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 11..248
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT DOMAIN 56..93
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
SQ SEQUENCE 483 AA; 54906 MW; C666104A76D383A1 CRC64;
MADTQTFLRD RCLTVLNLPE KGRSLFISRD FRPGEVILRQ EPYVSVPNNN SSESRCDGCF
KTDGLKKCSG CQVVWYCGSS CQKSEWKLHR HECKALCRLE KEKRMLVTPT IRLMVKLYLK
RNFQNEKVIP ITTTDDYSLV EALVSHMPEL DEKQLMLYAQ MANLVNLILQ FPGIDLKEIA
ENFSKFSCNA HSICDSELRP EGIGLFPLVS IINHSCSPNA VLVFEEKMAV VRAMDNISKD
SEVTISYIET AGSTLTRQKS LKEQYLFHCH CARCSNIGKP HDIEESAILE GYRCANEKCS
GFLLRDPDEK GFVCQKCMLL RSKEEVKKLA GDVKTVIAKA PASPSAENTQ DAIALYKTLE
KRQEKLYHSF SITLMRTREK LLKMLMEVES WREALSYCKL IVLVYQRVYP ATHPLIGLQF
YTQGKLEWLL GQTEEAVSSL IKAYDILRIS HGTSTPFMKD LSAKLDEARA EASYKLLALE
DGN
//
