ID A0A0D3D4Y5_BRAOL Unreviewed; 172 AA.
AC A0A0D3D4Y5;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE RecName: Full=Retrotransposon gag domain-containing protein {ECO:0000259|Pfam:PF03732};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo7g031730.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo7g031730.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo7g031730.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3D4Y5; -.
DR EnsemblPlants; Bo7g031730.1; Bo7g031730.1; Bo7g031730.
DR Gramene; Bo7g031730.1; Bo7g031730.1; Bo7g031730.
DR eggNOG; KOG0017; Eukaryota.
DR HOGENOM; CLU_1557425_0_0_1; -.
DR Proteomes; UP000032141; Chromosome C7.
DR InterPro; IPR005162; Retrotrans_gag_dom.
DR Pfam; PF03732; Retrotrans_gag; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 4..54
FT /note="Retrotransposon gag"
FT /evidence="ECO:0000259|Pfam:PF03732"
FT REGION 93..172
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 93..125
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 133..149
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 172 AA; 19738 MW; DDFABF51E65D0247 CRC64;
MFIDRETSDV DLWSLSQREE EPLREFISRF KLVMSRVSGI SDKVAIDTLR KALWYKSKFR
KWTSLEKPRT ILDALHKVTD YIMMEEETKI LSQKHKLARS SSKDVDPKTR KKNPRNDKKD
DFTSSADADA LGVETQHEAR ADTTIQPEHP EENTDPATII SIKAVSTATT AE
//