ID   A0A0D3D612_BRAOL        Unreviewed;       278 AA.
AC   A0A0D3D612;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   27-MAR-2024, entry version 29.
DE   RecName: Full=Reverse transcriptase zinc-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo7g045400.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo7g045400.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo7g045400.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
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DR   AlphaFoldDB; A0A0D3D612; -.
DR   EnsemblPlants; Bo7g045400.1; Bo7g045400.1; Bo7g045400.
DR   Gramene; Bo7g045400.1; Bo7g045400.1; Bo7g045400.
DR   eggNOG; KOG1075; Eukaryota.
DR   HOGENOM; CLU_000680_14_2_1; -.
DR   Proteomes; UP000032141; Chromosome C7.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR   InterPro; IPR002156; RNaseH_domain.
DR   InterPro; IPR026960; RVT-Znf.
DR   PANTHER; PTHR46736:SF95; RNASE H DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR46736; ZF-RVT DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF13456; RVT_3; 1.
DR   Pfam; PF13966; zf-RVT; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT   DOMAIN          54..115
FT                   /note="Reverse transcriptase zinc-binding"
FT                   /evidence="ECO:0000259|Pfam:PF13966"
FT   DOMAIN          156..252
FT                   /note="RNase H type-1"
FT                   /evidence="ECO:0000259|Pfam:PF13456"
SQ   SEQUENCE   278 AA;  32117 MW;  F8A78296BD90B9B5 CRC64;
     MVQSLAISST HRHDTFCWSY TKNGQYTVKS GYLVATNLMR DEEDIEVLQP SITKLQAFAW
     KVNAPQKICH FIWQLISGKV AVTRNLVRRN MRCDNYCPRC GVPEETVTHA IFESRNDKLF
     RGIDRDPLEL VRYAESECQA WYNARDTAPV PPQDTLGKIQ LMGSRNLRRR KTTLHSELEA
     LQWAMESMIQ HSTCQRFGTD CKDLIAMIEQ PQAWSNYSTE LEIIQTLRLY FSDSKISYFP
     MTQNEIADSL AMTAHSFHRS LCFIGCSIPV WLPRPPQV
//