ID A0A0D3DEN9_BRAOL Unreviewed; 508 AA.
AC A0A0D3DEN9;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=PDZ domain-containing protein {ECO:0000259|PROSITE:PS50106};
GN Name=106306734 {ECO:0000313|EnsemblPlants:Bo7g105370.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo7g105370.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo7g105370.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo7g105370.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the peptidase S41A family.
CC {ECO:0000256|ARBA:ARBA00009179}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR RefSeq; XP_013598915.1; XM_013743461.1.
DR AlphaFoldDB; A0A0D3DEN9; -.
DR STRING; 109376.A0A0D3DEN9; -.
DR MEROPS; S41.002; -.
DR EnsemblPlants; Bo7g105370.1; Bo7g105370.1; Bo7g105370.
DR GeneID; 106306734; -.
DR Gramene; Bo7g105370.1; Bo7g105370.1; Bo7g105370.
DR KEGG; boe:106306734; -.
DR eggNOG; ENOG502QSWI; Eukaryota.
DR HOGENOM; CLU_017295_0_2_1; -.
DR OMA; HNKQESE; -.
DR OrthoDB; 5489495at2759; -.
DR Proteomes; UP000032141; Chromosome C7.
DR ExpressionAtlas; A0A0D3DEN9; baseline.
DR GO; GO:0008236; F:serine-type peptidase activity; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd00988; PDZ_CTP_protease; 1.
DR CDD; cd07560; Peptidase_S41_CPP; 1.
DR Gene3D; 2.30.42.10; -; 1.
DR Gene3D; 3.30.750.44; -; 1.
DR InterPro; IPR029045; ClpP/crotonase-like_dom_sf.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR041489; PDZ_6.
DR InterPro; IPR036034; PDZ_sf.
DR InterPro; IPR004447; Peptidase_S41A.
DR InterPro; IPR005151; Tail-specific_protease.
DR NCBIfam; TIGR00225; prc; 1.
DR PANTHER; PTHR32060:SF22; CARBOXYL-TERMINAL-PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED; 1.
DR PANTHER; PTHR32060; TAIL-SPECIFIC PROTEASE; 1.
DR Pfam; PF17820; PDZ_6; 1.
DR Pfam; PF03572; Peptidase_S41; 1.
DR SMART; SM00228; PDZ; 1.
DR SMART; SM00245; TSPc; 1.
DR SUPFAM; SSF52096; ClpP/crotonase; 1.
DR SUPFAM; SSF50156; PDZ domain-like; 1.
DR PROSITE; PS50106; PDZ; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022825};
KW Protease {ECO:0000256|ARBA:ARBA00022825};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Serine protease {ECO:0000256|ARBA:ARBA00022825}.
FT DOMAIN 191..279
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
SQ SEQUENCE 508 AA; 55051 MW; 41C9F09E637EFC8E CRC64;
MEVLASSSLS PIFTKRNTIN PNFSIQVKLF VSQPSKTLKA SSFRYARPPR RIANPGLVFV
CNRCWCLLER NDHRKFSGKI MMKSSVSFRK NLSVALVRLV SVLLVSSISV VTTDSPSWGL
SEENLLFLEA WRTIDRAYID KTFNGQSWFR YRESALRNEP MNNREETYMA IKKMIATLDD
PFTRFLEPGK FQSLRSGTQG AVTGVGLSIG YPAASDGAAA GLVVISAAPG GPAYRAGVSQ
GDVILGIDNT TTETLTIYDA AQMLQGPEGS TVELAVRSGP ETRVLSLTRE RVSVNPVKAR
LCELPGSGSN SPKIGYIKLT TFNQNASGAV KEAIETLRGN NVNAFVLDLR DNSGGSFPEG
IEIAKFWLDK GVIVYICDSR GVRDIYDTDG SNAIATSEPL AVLVNKGTAS ASEILAGALK
DNKRALVYGE PTYGKGKIQS VFQLSDGSGL AVTVARYETP AHTDIDKVGV TPDHPLPKSF
PKDEEAFCGC LKDPTAACYL NQGLLFSR
//
