ID A0A0D3DEV8_BRAOL Unreviewed; 616 AA.
AC A0A0D3DEV8;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=106301309 {ECO:0000313|EnsemblPlants:Bo7g106060.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo7g106060.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo7g106060.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo7g106060.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013593127.1; XM_013737673.1.
DR AlphaFoldDB; A0A0D3DEV8; -.
DR STRING; 109376.A0A0D3DEV8; -.
DR EnsemblPlants; Bo7g106060.1; Bo7g106060.1; Bo7g106060.
DR GeneID; 106301309; -.
DR Gramene; Bo7g106060.1; Bo7g106060.1; Bo7g106060.
DR KEGG; boe:106301309; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_10_1; -.
DR OMA; MFVCLLN; -.
DR OrthoDB; 1215551at2759; -.
DR Proteomes; UP000032141; Chromosome C7.
DR GO; GO:0009507; C:chloroplast; IEA:EnsemblPlants.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:1900865; P:chloroplast RNA modification; IEA:EnsemblPlants.
DR GO; GO:0008380; P:RNA splicing; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR24015:SF739; OS03G0644200 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 147..181
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 248..282
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 349..383
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 450..484
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 520..550
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 551..585
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 25..47
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..47
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 616 AA; 69221 MW; A5C76B3C247D844E CRC64;
MFSLTLIQPH LRIPEIPATR TLKSSTLPPL ITDSRPKRDE QRNRRSSGFR LFSRKRTTFD
MGFSDNFGLE LPGENASYDS SRVDYALLAE WLQSSNGMRL IKRIHAMALK CFDDQVIYFG
NNLISACVRL GDLVYARKVF DSMPERNTVT WTAMIDGYLK YGLEDEAFSL FEDYVKHGIR
YTNGRMFVCL LNLCSRRPEF ELGRQVHGSM VKVRVENLIV ESSLVYFYAQ CGELTSALRA
FDMMEEKDVI SWTAVISACS RKGHGNKAIV MFIGMLEHGF LPNEFTVCSI LKACSEEKAL
RFGRQVHSLV VKKMIKKDVF VGTSLMDMYA KCGEISACRK VFDGMSNRNT VTWTSIIAAH
AREGFGEDAI SLFRVMKRRH LIANNLTVVS ILRACGSVGA LLLGKELHAQ IIKNSIEKNV
YIGSTLVWLY CKCGESRDAF NVLQQLPSRD VVSWTAMISG CSSLGHEAEA LDFLKEMIQD
GVEPNPFTYS SALKACANSE ALLIGRSIHS IAEKNHALSN VFVGSALIHM YAKCGFVSEA
FRVFDSMPEK NLVSWKAMIM GYARNGFCRE ALKLMYRMEA EGFEVDDYIF ATILSTCGDI
ELDEAEASAT CYLETS
//
