ID A0A0D3DG75_BRAOL Unreviewed; 383 AA.
AC A0A0D3DG75;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=GATA-type domain-containing protein {ECO:0000259|PROSITE:PS50114};
GN Name=106304178 {ECO:0000313|EnsemblPlants:Bo7g110740.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo7g110740.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo7g110740.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo7g110740.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013596028.1; XM_013740574.1.
DR AlphaFoldDB; A0A0D3DG75; -.
DR SMR; A0A0D3DG75; -.
DR STRING; 109376.A0A0D3DG75; -.
DR EnsemblPlants; Bo7g110740.1; Bo7g110740.1; Bo7g110740.
DR GeneID; 106304178; -.
DR Gramene; Bo7g110740.1; Bo7g110740.1; Bo7g110740.
DR KEGG; boe:106304178; -.
DR eggNOG; KOG1601; Eukaryota.
DR HOGENOM; CLU_060197_0_1_1; -.
DR OMA; EADHHNI; -.
DR OrthoDB; 3616433at2759; -.
DR Proteomes; UP000032141; Chromosome C7.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0050793; P:regulation of developmental process; IEA:UniProt.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00202; ZnF_GATA; 1.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR47255; GATA TRANSCRIPTION FACTOR 22-RELATED; 1.
DR PANTHER; PTHR47255:SF17; GATA TRANSCRIPTION FACTOR 22-RELATED; 1.
DR Pfam; PF00320; GATA; 1.
DR SMART; SM00401; ZnF_GATA; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR PROSITE; PS50114; GATA_ZN_FINGER_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00094};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00094};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00094}.
FT DOMAIN 221..251
FT /note="GATA-type"
FT /evidence="ECO:0000259|PROSITE:PS50114"
FT REGION 128..149
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 383 AA; 42838 MW; 786429817A372245 CRC64;
MGSNFRYTID LNEDHQNHQP FFSSFGSSIH QNHDHQQRLY HHHQALSNPT FSSSSLASPS
LSYLPFLINS HQDQVHVGYN NHTFHGFLDP HISQPLETKK FVYDGGSSSS DQMMPEKETR
LKLTIRKNDN HHDQTDLPQY PTKGETESNS LKWMSSKVRL MKRKTMITPT DNNRQYVKND
QSLNVSNLEE DHLKKISKNQ YNMIANENGY NGSNNCVTRI CSDCNTTKTP LWRSGPRGPK
SLCNACGIRQ RKARQAAMAA SGATTTSDLS PPLLKKKIQN KNKRSNKVGS LSSPLASKVH
KYKSMTTSVA EAVLMMDGIT GDLETQVKST MSSSSTSTSS NKCCFDELAI ILSKSSAYQQ
VFPQDEKEAA ILLMALSYGI VHG
//
