ID A0A0D3DIP2_BRAOL Unreviewed; 607 AA.
AC A0A0D3DIP2;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=106307959 {ECO:0000313|EnsemblPlants:Bo8g002490.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g002490.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo8g002490.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo8g002490.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013600513.1; XM_013745059.1.
DR AlphaFoldDB; A0A0D3DIP2; -.
DR STRING; 109376.A0A0D3DIP2; -.
DR EnsemblPlants; Bo8g002490.1; Bo8g002490.1; Bo8g002490.
DR GeneID; 106307959; -.
DR Gramene; Bo8g002490.1; Bo8g002490.1; Bo8g002490.
DR KEGG; boe:106307959; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_10_1; -.
DR OMA; AICWTSV; -.
DR OrthoDB; 1214693at2759; -.
DR Proteomes; UP000032141; Chromosome C8.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47925; OS01G0913400 PROTEIN-RELATED; 1.
DR PANTHER; PTHR47925:SF178; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 124..159
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 226..261
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 297..327
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 328..362
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 425..459
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 607 AA; 67753 MW; D1FC9A0079FCA6E5 CRC64;
MNLILKRHFS QRLTPLVNVS ASSPTKQSRI LEYCKRGRLT DAIRILNTTL SCDISAKPNL
YAALLQTCTK VLSFTHGLQF HAHVVKSGLE TDRYVGNSLL ALYFKLGHDM KETRRVFDGM
FVKDAISWTS MMSGYVRGKE HVKALEMFVE MVVSFGFEPN AFTLSAAVKA CSQIGDVRLG
RCFHCVVIAR GFEWNHVISS TLAYMYGVNQ EPVDARRVFD EMPEPDVFSW TAVLSAYSKN
DLYEQALGLF YVVNRGKGLV PDESTFGTVL TACGNLRRVK RGKEIHGKLI TNGISSNVVV
ESSLLDMYGK CGSVREARQV FNGMSKKNTV SWSALLGGYS QNGEHERVIE MFREMDEKDL
YCFGTLLKAC AGLAAVRLGK EVHGQYVRRG CRDNVIVESA LVDLYGKSGC VDSATRVYSK
MTIRNMITWN AMLSALAQNG RGEEAVSFFN DMVKKGIKPD YISFIAVLTA CSHTGLVEEG
RNYFAMMTES YGIKPGTEHY SCMIDLLGRA GLFEEAENML ERAECRDDAS LWGVLLGPCA
ADADALAIAE RIAKRMMELD PKYHMSYVLL SNMYKSIGRH GDALKIRRLM VRRGVIKTIG
QSWVDAH
//
