ID A0A0D3DJU0_BRAOL Unreviewed; 380 AA.
AC A0A0D3DJU0;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=Chromo domain-containing protein {ECO:0000259|PROSITE:PS50013};
GN Name=106312625 {ECO:0000313|EnsemblPlants:Bo8g016370.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g016370.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo8g016370.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo8g016370.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013605664.1; XM_013750210.1.
DR AlphaFoldDB; A0A0D3DJU0; -.
DR STRING; 109376.A0A0D3DJU0; -.
DR EnsemblPlants; Bo8g016370.1; Bo8g016370.1; Bo8g016370.
DR GeneID; 106312625; -.
DR Gramene; Bo8g016370.1; Bo8g016370.1; Bo8g016370.
DR KEGG; boe:106312625; -.
DR eggNOG; KOG0504; Eukaryota.
DR HOGENOM; CLU_712464_0_0_1; -.
DR OMA; DGHAPSW; -.
DR OrthoDB; 472832at2759; -.
DR Proteomes; UP000032141; Chromosome C8.
DR GO; GO:0009507; C:chloroplast; IEA:EnsemblPlants.
DR GO; GO:0032991; C:protein-containing complex; IEA:EnsemblPlants.
DR GO; GO:0097718; F:disordered domain specific binding; IEA:EnsemblPlants.
DR GO; GO:0042802; F:identical protein binding; IEA:EnsemblPlants.
DR GO; GO:0030674; F:protein-macromolecule adaptor activity; IEA:EnsemblPlants.
DR GO; GO:0070208; P:protein heterotrimerization; IEA:EnsemblPlants.
DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants.
DR CDD; cd18629; CD2_cpSRP43_like; 2.
DR Gene3D; 2.40.50.40; -; 3.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR PANTHER; PTHR24189; MYOTROPHIN; 1.
DR PANTHER; PTHR24189:SF69; OS04G0351300 PROTEIN; 1.
DR Pfam; PF12796; Ank_2; 1.
DR Pfam; PF00385; Chromo; 1.
DR SMART; SM00248; ANK; 2.
DR SMART; SM00298; CHROMO; 3.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 3.
DR PROSITE; PS50297; ANK_REP_REGION; 2.
DR PROSITE; PS50088; ANK_REPEAT; 2.
DR PROSITE; PS50013; CHROMO_2; 1.
PE 4: Predicted;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW ProRule:PRU00023}; Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 156..188
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 190..222
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 317..363
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
SQ SEQUENCE 380 AA; 42205 MW; 1AD412BDC66902E9 CRC64;
MDTSSLVINH HQSLSRIIKL PHVPKSYAFS SFQSFQTRQL LNKQLSFRAT SPAAVQRDNY
ETASFVEDDD ESYGEVNRII GSRMAAGGGG AAMEYLIEWK DGHSPSWVPS SYIAADVVSE
YETPWWTAAR KADDQALAQL LESSEGRRDA NTVDENGRTA LLFVAGLGSD KCVRLLSEAG
ADLDHRDIRG GLTALHMAAG YVQPDAVAAL VELGADAEVE DERGLTPLEL AREILKTTPK
GNPMQFGRRI GLEKVISILE DQVFEYAEVE EILEKRGRGK DVEYLVKWKD GGDCDWVKGV
HVAEDVVKDY EAGLEYAVAE RVMGKRMGDD GNTEYLVKWT DMADATWEPE ENVNISLVQL
YEQEEEAQPV NELELGIIKE
//
