ID A0A0D3DPN8_BRAOL Unreviewed; 307 AA.
AC A0A0D3DPN8;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=UBC core domain-containing protein {ECO:0000259|PROSITE:PS50127};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g066020.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo8g066020.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo8g066020.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the ubiquitin-conjugating enzyme family.
CC {ECO:0000256|RuleBase:RU362109}.
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DR AlphaFoldDB; A0A0D3DPN8; -.
DR STRING; 109376.A0A0D3DPN8; -.
DR EnsemblPlants; Bo8g066020.1; Bo8g066020.1; Bo8g066020.
DR Gramene; Bo8g066020.1; Bo8g066020.1; Bo8g066020.
DR eggNOG; KOG0419; Eukaryota.
DR HOGENOM; CLU_907201_0_0_1; -.
DR OMA; IWDDGIF; -.
DR Proteomes; UP000032141; Chromosome C8.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR CDD; cd00195; UBCc; 2.
DR Gene3D; 3.10.110.10; Ubiquitin Conjugating Enzyme; 2.
DR InterPro; IPR000608; UBQ-conjugat_E2.
DR InterPro; IPR023313; UBQ-conjugating_AS.
DR InterPro; IPR016135; UBQ-conjugating_enzyme/RWD.
DR PANTHER; PTHR24067; UBIQUITIN-CONJUGATING ENZYME E2; 1.
DR PANTHER; PTHR24067:SF274; UBIQUITIN-CONJUGATING ENZYME E2 1; 1.
DR Pfam; PF00179; UQ_con; 2.
DR SMART; SM00212; UBCc; 2.
DR SUPFAM; SSF54495; UBC-like; 2.
DR PROSITE; PS00183; UBC_1; 2.
DR PROSITE; PS50127; UBC_2; 2.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|RuleBase:RU362109};
KW Nucleotide-binding {ECO:0000256|RuleBase:RU362109};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786,
KW ECO:0000256|RuleBase:RU362109}.
FT DOMAIN 4..154
FT /note="UBC core"
FT /evidence="ECO:0000259|PROSITE:PS50127"
FT DOMAIN 179..307
FT /note="UBC core"
FT /evidence="ECO:0000259|PROSITE:PS50127"
FT ACT_SITE 92
FT /note="Glycyl thioester intermediate"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU10133"
FT ACT_SITE 263
FT /note="Glycyl thioester intermediate"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU10133"
SQ SEQUENCE 307 AA; 34885 MW; B2227FBFC36FD79A CRC64;
MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGYSNKPDDT PWDGGTFKLS
LQFSEDYPNK PPTVRFVSRM FHPNIYADGS ICLDILQNQW SPIYDVAAIL TSIQSLLCDP
NPNSPANSEA ARMYSESKRE YNRRISVRFE SKNSEENNFV TKVDIPGAGA EKHTRRMSPA
RKRLMRDFES LRQDPPAGIS GAPQDNNIML WNAVIFGPED SPWDGGTFKL SLQFSEEYPN
KPPRVRFVSR MFHPNIYADG RVCLDILQNQ WTPVYNVVAI LISIQSLLCD PNTNSYANSD
VVEQSWN
//
