ID A0A0D3DRL8_BRAOL Unreviewed; 331 AA.
AC A0A0D3DRL8;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN Name=106307474 {ECO:0000313|EnsemblPlants:Bo8g077770.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g077770.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo8g077770.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo8g077770.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR RefSeq; XP_013599895.1; XM_013744441.1.
DR RefSeq; XP_013599896.1; XM_013744442.1.
DR AlphaFoldDB; A0A0D3DRL8; -.
DR STRING; 109376.A0A0D3DRL8; -.
DR EnsemblPlants; Bo8g077770.1; Bo8g077770.1; Bo8g077770.
DR GeneID; 106307474; -.
DR Gramene; Bo8g077770.1; Bo8g077770.1; Bo8g077770.
DR KEGG; boe:106307474; -.
DR eggNOG; KOG0118; Eukaryota.
DR HOGENOM; CLU_042473_2_0_1; -.
DR OMA; ADTKPAC; -.
DR OrthoDB; 666182at2759; -.
DR Proteomes; UP000032141; Chromosome C8.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12459; RRM1_CID8_like; 1.
DR CDD; cd12460; RRM2_CID8_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR009818; Ataxin-2_C.
DR InterPro; IPR034823; CID8-like_RRM1.
DR InterPro; IPR034825; CID8-like_RRM2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR32343:SF10; LD29830P; 1.
DR PANTHER; PTHR32343; SERINE/ARGININE-RICH SPLICING FACTOR; 1.
DR Pfam; PF07145; PAM2; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 147..222
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 244..319
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..75
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 28..44
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 56..75
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 331 AA; 36262 MW; 57A17C5977E8AA20 CRC64;
MAVAENAGVK VESSSAADTK PACPDDDKSP NSDSSSLDSS DPPTPDSDGR TDEVPQKDQT
QTTPNGESGG SLNKSEIKDL SDAFSKLNPM AKEFVPRTRS GGNGLGFTNN FADGSHHLAT
RRRSFGQGKR RMNKRTSLAQ KEDVIRRTVY VSEIDQQVTE ENLAGVFVNC GQVVDCRVCG
DPKSVLRFAF VEFTNEEGAR AALSMSGTML GFYPLKVLPS KTAIAPVNPT FLPRSEDERE
MCVRTVYCTN IDKRVSQTDL KGFFEMLCGE VHRLRLGDYH HQTRFAFVEF AMAESAIAAL
HYSGIVLGAL PIRVSPSKTP VRPHLHRPEC K
//
