ID A0A0D3DTA8_BRAOL Unreviewed; 651 AA.
AC A0A0D3DTA8;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo8g089610.1};
GN Name=106312018 {ECO:0000313|EnsemblPlants:Bo8g089610.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g089610.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo8g089610.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo8g089610.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013604841.1; XM_013749387.1.
DR AlphaFoldDB; A0A0D3DTA8; -.
DR STRING; 109376.A0A0D3DTA8; -.
DR EnsemblPlants; Bo8g089610.1; Bo8g089610.1; Bo8g089610.
DR GeneID; 106312018; -.
DR Gramene; Bo8g089610.1; Bo8g089610.1; Bo8g089610.
DR KEGG; boe:106312018; -.
DR eggNOG; KOG0118; Eukaryota.
DR HOGENOM; CLU_424151_0_0_1; -.
DR OMA; CMKFPES; -.
DR OrthoDB; 393471at2759; -.
DR Proteomes; UP000032141; Chromosome C8.
DR GO; GO:0019898; C:extrinsic component of membrane; IEA:EnsemblPlants.
DR GO; GO:0009524; C:phragmoplast; IEA:EnsemblPlants.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009920; P:cell plate formation involved in plant-type cell wall biogenesis; IEA:EnsemblPlants.
DR GO; GO:0000914; P:phragmoplast assembly; IEA:EnsemblPlants.
DR CDD; cd12271; RRM1_PHIP1; 1.
DR CDD; cd12272; RRM2_PHIP1; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 4.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR034361; PHIP1_RRM1.
DR InterPro; IPR034362; PHIP1_RRM2.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR23236; EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H; 1.
DR Pfam; PF00076; RRM_1; 2.
DR Pfam; PF00098; zf-CCHC; 3.
DR SMART; SM00360; RRM; 2.
DR SMART; SM00343; ZnF_C2HC; 4.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 4.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 2.
DR PROSITE; PS50158; ZF_CCHC; 4.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 166..243
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 266..342
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 388..403
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 459..474
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 537..552
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 632..647
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 23..144
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 549..570
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 23..45
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 48..111
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 112..129
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 130..144
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 651 AA; 72076 MW; 2DE4F8DE5B971898 CRC64;
MVLSNKKLKQ KLRQDLVKSL SVSVAETNPE SASSLQSQSL KSLLDSASHK PRLSKREIRR
KLDTSTRGDE PNEVERDAAK TDEKNTKKRK RDDTVEDKVG EEGEGEESQK KKTKKKKQKK
KKKKRKVNKT PKKADEDKVE EKVKTEEIQV ETESKEEEEE DGIVPKKIYV GGIPYQSTED
EIRSYFRSCG VITKVDCKMR PEDGAFTGIA FITFETEDGA NRALAFDRAA MGDRYLTIQQ
YVKTTPSVPR TRTSSGFVPE MVEGYHRVYI GNLAWDTTER EIRKLFSDCV INTVRLGKNK
ETGDFKGYAH VDFKDSVSVA MALKLDQQVI CGRPVKICCA LKERPVGDHS TNPTPGETNN
ADETDAAADD VNYFENTMSS GKIKRRSCYE CGEKGHLSTA CPKKLQETVT ARPPTMPSYD
LQRSYGGSYM DETYTATNEG YSEGLASEVS TGKVKRRTCY ECGEKGHLST ACPKKLQDAH
KETVNARPAM FSYDYHQKNN GGGGGSYMNE TYTAANEATS GSLPSEVSIG KIKRRSCYEC
GEKGHLSTAC PNKLQNSDRT NSKADHQAVE ARPVQVTSYN IQKESGDTDN IGGSYMDVTH
AAEPVSVAVT VGTNEGGSAS KVSAGKMKRR ICHECGLKGH LSSACPKKQQ K
//
