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Database: UniProt
Entry: A0A0D3DVJ8_BRAOL
LinkDB: A0A0D3DVJ8_BRAOL
Original site: A0A0D3DVJ8_BRAOL 
ID   A0A0D3DVJ8_BRAOL        Unreviewed;       535 AA.
AC   A0A0D3DVJ8;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 28.
DE   RecName: Full=Carotenoid cleavage dioxygenase 1 {ECO:0008006|Google:ProtNLM};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g099490.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo8g099490.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo8g099490.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
CC   -!- COFACTOR:
CC       Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC         Evidence={ECO:0000256|PIRSR:PIRSR604294-1};
CC       Note=Binds 1 Fe(2+) ion per subunit. {ECO:0000256|PIRSR:PIRSR604294-1};
CC   -!- SIMILARITY: Belongs to the carotenoid oxygenase family.
CC       {ECO:0000256|ARBA:ARBA00006787}.
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DR   AlphaFoldDB; A0A0D3DVJ8; -.
DR   STRING; 109376.A0A0D3DVJ8; -.
DR   EnsemblPlants; Bo8g099490.1; Bo8g099490.1; Bo8g099490.
DR   Gramene; Bo8g099490.1; Bo8g099490.1; Bo8g099490.
DR   eggNOG; KOG1285; Eukaryota.
DR   HOGENOM; CLU_016472_0_0_1; -.
DR   OMA; LENTNSM; -.
DR   Proteomes; UP000032141; Chromosome C8.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:InterPro.
DR   InterPro; IPR004294; Carotenoid_Oase.
DR   PANTHER; PTHR10543; BETA-CAROTENE DIOXYGENASE; 1.
DR   PANTHER; PTHR10543:SF117; BNAA09G41150D PROTEIN; 1.
DR   Pfam; PF03055; RPE65; 2.
PE   3: Inferred from homology;
KW   Dioxygenase {ECO:0000256|ARBA:ARBA00022964};
KW   Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|PIRSR:PIRSR604294-1};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW   ECO:0000256|PIRSR:PIRSR604294-1};
KW   Oxidoreductase {ECO:0000256|ARBA:ARBA00022964};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        272..293
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        300..321
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   BINDING         121
FT                   /ligand="Fe cation"
FT                   /ligand_id="ChEBI:CHEBI:24875"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR604294-1"
FT   BINDING         194
FT                   /ligand="Fe cation"
FT                   /ligand_id="ChEBI:CHEBI:24875"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR604294-1"
FT   BINDING         520
FT                   /ligand="Fe cation"
FT                   /ligand_id="ChEBI:CHEBI:24875"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR604294-1"
SQ   SEQUENCE   535 AA;  60243 MW;  33050CE36DEAA6BF CRC64;
     MIHGVRIKDG KATYVSRFVK TSRLQQEEFF GDAKLMKIGD LKGFFGLVMV IMQQLRIKLK
     VLDDSYGNGT ANTSLIYHHG KLLALQETDK PYVIKVLEDG DLQTLGMTEY DKRLTHSFTA
     HPKVDPVTGK SSIFPEKHDI VFLLTHDVPY LFTGEMFTFG CSPMPPYLTY RVISKDGIMH
     DPVPITISKP IMMHDFAITE NYAIFMDLPM HFRPKEMVKE KKMIYSFDPT KKARFGIQVY
     IGLRAALSCE WIRQLFVWVT LELRFMTLVS DIPMVLVLFG PTLATSNSIF IALARSSAVC
     SSLTGSIPGI GVMFVYLSSW WQVEEKLIFI FSLMNMDVAG YDFSLVPRLN QSSFLILPPI
     WSELEEQASL VLQGSSSHRM LFSAYGAVCV VLRVTLDAIF EVAYDVFVIR SHMFAFFLDG
     IPRVKGIIKF DLHAEAETGK TKLRVGGNIK GIYEMGQGTY GSDAIYVSGA TAEEDDGYLI
     FYAHDENTGK SCVNVIDAKT MSSEPVAVVE LPHRVPYGFH ALFVTEEQLQ EQTLI
//
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