ID A0A0D3DXR9_BRAOL Unreviewed; 618 AA.
AC A0A0D3DXR9;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=RFP1 {ECO:0008006|Google:ProtNLM};
GN Name=106308230 {ECO:0000313|EnsemblPlants:Bo8g108190.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g108190.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo8g108190.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo8g108190.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR RefSeq; XP_013600826.1; XM_013745372.1.
DR AlphaFoldDB; A0A0D3DXR9; -.
DR EnsemblPlants; Bo8g108190.1; Bo8g108190.1; Bo8g108190.
DR GeneID; 106308230; -.
DR Gramene; Bo8g108190.1; Bo8g108190.1; Bo8g108190.
DR KEGG; boe:106308230; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR OMA; VSKECDP; -.
DR OrthoDB; 463517at2759; -.
DR Proteomes; UP000032141; Chromosome C8.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 14.
DR PANTHER; PTHR47938:SF50; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47938; RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 6.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 14.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 103..137
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 138..172
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 173..207
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 208..242
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 243..277
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 278..312
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 313..347
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 348..382
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 383..417
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 418..452
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 453..487
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 488..522
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 523..557
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 558..592
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 618 AA; 68978 MW; 7C6B0FE3F83A7A99 CRC64;
MLCRRLVLVS RIPATPLLSS CERGYSGLGS YRNLSCYKER LRSGIVGIKK KDAVALFQSM
IRSRPLPTVM DFNKLFSAVA RTKQYDLVLD LCKQMELQGI AHSIYTLSIM INCFCRLQKL
GFAFSVMGKM LKLGYEPDTI TFSTLINGLC LVGRVSKAVE LVDRMVEMEV IPNLITLNTI
VNGLCLQGEV SEAMALIDRM IDNGCQPNER TYGPVLNRMC KSGNTALALD LLRKMEHRKI
KLDAVTYNFI IDSLCKDGSL EDALSLFNEM ETKGIKPNVF NYNSLIRGFF SAGRWDDGAP
LLRDMITRGI TPTVITFNSL IDSFVKVGKL TEAQDLYNEM ITRGTDPDII TYNSMINGLC
NEKRLGKANQ MLDLMVSKEC DPDIVTYNTL INGYCKAKRV DEGMRHFRKM CMGGVVANTF
TYNTLIQGFC QSGKLNVAKE LFHEMVSQGV HPDIVTYKIL LDGLCDNGEV EEALGILDQM
HKSNMELDIG LYTIIIHGMC NANKVDDAWS LFCSLRSKGV KPDVKTYTTM IGGLCKKGSL
SEAGMLCKKM EEDGIAPNDC TYNTLIRAHL RDGDLTKSAK LIEEMKRCGF SANASTIKIV
MDMLSDGRMK KSFLDMLS
//
