ID A0A0D3DYD5_BRAOL Unreviewed; 403 AA.
AC A0A0D3DYD5;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 28.
DE RecName: Full=MSP domain-containing protein {ECO:0000259|PROSITE:PS50202};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g112330.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo8g112330.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo8g112330.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17)
CC family. {ECO:0000256|ARBA:ARBA00008932}.
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DR AlphaFoldDB; A0A0D3DYD5; -.
DR STRING; 109376.A0A0D3DYD5; -.
DR EnsemblPlants; Bo8g112330.1; Bo8g112330.1; Bo8g112330.
DR Gramene; Bo8g112330.1; Bo8g112330.1; Bo8g112330.
DR eggNOG; KOG0439; Eukaryota.
DR HOGENOM; CLU_036554_0_0_1; -.
DR OMA; PRMVGND; -.
DR Proteomes; UP000032141; Chromosome C8.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:InterPro.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR000535; MSP_dom.
DR InterPro; IPR008962; PapD-like_sf.
DR InterPro; IPR016763; VAP.
DR PANTHER; PTHR10809:SF125; MSP DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR10809; VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN; 1.
DR Pfam; PF00635; Motile_Sperm; 1.
DR SUPFAM; SSF49354; PapD-like; 1.
DR PROSITE; PS50202; MSP; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..21
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 22..403
FT /note="MSP domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002260673"
FT TRANSMEM 380..401
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 59..179
FT /note="MSP"
FT /evidence="ECO:0000259|PROSITE:PS50202"
FT REGION 19..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 317..379
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 403 AA; 44955 MW; 859F558FDC7B0371 CRC64;
CVFSLVAFFL YLIAPSPPIS SSVDSSSGAK RERERERERE SLLQVVAEIL SQSTMNMPLL
DIQPPTLKFP VDLKKQTTCM VQLTNTTDRF VAFKVKTTSP KKYCVRPNVG VVAPNSSCEF
SVIMQAFKEP PLDLACKDKF LIQSTAVPAD TTDEDITASM FSKGEGKHIE ENKLRVTLVM
PSDSPELSPV KGTLKQEAVF EDSMLKDRSY FQSEILPPPQ YESEIVKEPR MVGNDELKAS
YGAKELVQPK KGVTDFMEDL NPANDLKPTH NLDTPTAMNF PGDKGFTNGM TSANGVTYPE
VVQLEKRDGQ KINASDEHKL VKDIEEMKVK VKALESKLQQ ADSTISKLME ERSIGSQHRE
SLQQELADLR TKKIVKEKHI GFPLLFVCVV AFINIVIGYG LRT
//