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Database: UniProt
Entry: A0A0D3DYD5_BRAOL
LinkDB: A0A0D3DYD5_BRAOL
Original site: A0A0D3DYD5_BRAOL 
ID   A0A0D3DYD5_BRAOL        Unreviewed;       403 AA.
AC   A0A0D3DYD5;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   08-NOV-2023, entry version 28.
DE   RecName: Full=MSP domain-containing protein {ECO:0000259|PROSITE:PS50202};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g112330.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo8g112330.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo8g112330.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17)
CC       family. {ECO:0000256|ARBA:ARBA00008932}.
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DR   AlphaFoldDB; A0A0D3DYD5; -.
DR   STRING; 109376.A0A0D3DYD5; -.
DR   EnsemblPlants; Bo8g112330.1; Bo8g112330.1; Bo8g112330.
DR   Gramene; Bo8g112330.1; Bo8g112330.1; Bo8g112330.
DR   eggNOG; KOG0439; Eukaryota.
DR   HOGENOM; CLU_036554_0_0_1; -.
DR   OMA; PRMVGND; -.
DR   Proteomes; UP000032141; Chromosome C8.
DR   GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:InterPro.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR000535; MSP_dom.
DR   InterPro; IPR008962; PapD-like_sf.
DR   InterPro; IPR016763; VAP.
DR   PANTHER; PTHR10809:SF125; MSP DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR10809; VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN; 1.
DR   Pfam; PF00635; Motile_Sperm; 1.
DR   SUPFAM; SSF49354; PapD-like; 1.
DR   PROSITE; PS50202; MSP; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW   Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL          1..21
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           22..403
FT                   /note="MSP domain-containing protein"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5002260673"
FT   TRANSMEM        380..401
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          59..179
FT                   /note="MSP"
FT                   /evidence="ECO:0000259|PROSITE:PS50202"
FT   REGION          19..39
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          317..379
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   403 AA;  44955 MW;  859F558FDC7B0371 CRC64;
     CVFSLVAFFL YLIAPSPPIS SSVDSSSGAK RERERERERE SLLQVVAEIL SQSTMNMPLL
     DIQPPTLKFP VDLKKQTTCM VQLTNTTDRF VAFKVKTTSP KKYCVRPNVG VVAPNSSCEF
     SVIMQAFKEP PLDLACKDKF LIQSTAVPAD TTDEDITASM FSKGEGKHIE ENKLRVTLVM
     PSDSPELSPV KGTLKQEAVF EDSMLKDRSY FQSEILPPPQ YESEIVKEPR MVGNDELKAS
     YGAKELVQPK KGVTDFMEDL NPANDLKPTH NLDTPTAMNF PGDKGFTNGM TSANGVTYPE
     VVQLEKRDGQ KINASDEHKL VKDIEEMKVK VKALESKLQQ ADSTISKLME ERSIGSQHRE
     SLQQELADLR TKKIVKEKHI GFPLLFVCVV AFINIVIGYG LRT
//
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