GenomeNet

Database: UniProt
Entry: A0A0D3E3T3_BRAOL
LinkDB: A0A0D3E3T3_BRAOL
Original site: A0A0D3E3T3_BRAOL 
ID   A0A0D3E3T3_BRAOL        Unreviewed;       294 AA.
AC   A0A0D3E3T3;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 49.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   Name=106313685 {ECO:0000313|EnsemblPlants:Bo9g028790.1};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo9g028790.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo9g028790.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo9g028790.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|PROSITE-ProRule:PRU00108}.
CC   -!- SIMILARITY: Belongs to the TALE/KNOX homeobox family.
CC       {ECO:0000256|PROSITE-ProRule:PRU00559}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   RefSeq; XP_013607027.1; XM_013751573.1.
DR   AlphaFoldDB; A0A0D3E3T3; -.
DR   SMR; A0A0D3E3T3; -.
DR   STRING; 109376.A0A0D3E3T3; -.
DR   EnsemblPlants; Bo9g028790.1; Bo9g028790.1; Bo9g028790.
DR   GeneID; 106313685; -.
DR   Gramene; Bo9g028790.1; Bo9g028790.1; Bo9g028790.
DR   KEGG; boe:106313685; -.
DR   eggNOG; KOG0773; Eukaryota.
DR   HOGENOM; CLU_040111_1_0_1; -.
DR   OMA; QSHHILR; -.
DR   OrthoDB; 3180467at2759; -.
DR   Proteomes; UP000032141; Chromosome C9.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   InterPro; IPR005539; ELK_dom.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR008422; Homeobox_KN_domain.
DR   InterPro; IPR005540; KNOX1.
DR   InterPro; IPR005541; KNOX2.
DR   PANTHER; PTHR11850:SF74; HOMEOBOX PROTEIN KNOTTED-1-LIKE 7; 1.
DR   PANTHER; PTHR11850; HOMEOBOX PROTEIN TRANSCRIPTION FACTORS; 1.
DR   Pfam; PF05920; Homeobox_KN; 1.
DR   Pfam; PF03790; KNOX1; 1.
DR   Pfam; PF03791; KNOX2; 1.
DR   SMART; SM00389; HOX; 1.
DR   SMART; SM01255; KNOX1; 1.
DR   SMART; SM01256; KNOX2; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   PROSITE; PS51213; ELK; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108};
KW   Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW   ProRule:PRU00108};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW   ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT   DOMAIN          197..217
FT                   /note="ELK"
FT                   /evidence="ECO:0000259|PROSITE:PS51213"
FT   DOMAIN          217..280
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000259|PROSITE:PS50071"
FT   DNA_BIND        218..281
FT                   /note="Homeobox; TALE-type"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
SQ   SEQUENCE   294 AA;  33152 MW;  5B4B24644403C795 CRC64;
     MQEAALGMIG ATVGGGGDED AAVVAEQNRQ MKGEIATHPM YDQLLAAHVA CLRVATPIDQ
     LPIIEAQLSH SHHLLRSYAS TAVGFSHHDR QELDNFLAQY VMVLCSFKEQ LQQHVRVHAV
     EAVMACREIE NNLHSLTGAT LGEGSGATMS EDEDDLHMDF SSDNSGVDFS GGHDMTGFGP
     LLPTESERSL MERVRQELKL ELKQGFKSRI EDVREEIMRK RRAGKLPGDT TTVLKNWWQQ
     HCKWPYPTED DKAKLVEETG LQLKQINNWF INQRKRNWHN NSHSLTSLKS KRKQ
//
DBGET integrated database retrieval system