ID A0A0D3E948_BRAOL Unreviewed; 372 AA.
AC A0A0D3E948;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 37.
DE RecName: Full=HMG box domain-containing protein {ECO:0000259|PROSITE:PS50118};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo9g091000.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo9g091000.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo9g091000.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3E948; -.
DR STRING; 109376.A0A0D3E948; -.
DR EnsemblPlants; Bo9g091000.1; Bo9g091000.1; Bo9g091000.
DR Gramene; Bo9g091000.1; Bo9g091000.1; Bo9g091000.
DR eggNOG; KOG0381; Eukaryota.
DR HOGENOM; CLU_041972_2_0_1; -.
DR OMA; KESASYH; -.
DR Proteomes; UP000032141; Chromosome C9.
DR GO; GO:0000794; C:condensed nuclear chromosome; IEA:EnsemblPlants.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd22007; HMG-box_AtHMGB6-like_rpt2; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 3.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR044601; HMGB6/HMGB13.
DR PANTHER; PTHR46912; HIGH MOBILITY GROUP B PROTEIN 13; 1.
DR PANTHER; PTHR46912:SF1; HIGH MOBILITY GROUP B PROTEIN 13; 1.
DR Pfam; PF00505; HMG_box; 3.
DR PRINTS; PR00886; HIGHMOBLTY12.
DR SMART; SM00398; HMG; 3.
DR SUPFAM; SSF47095; HMG-box; 3.
DR PROSITE; PS50118; HMG_BOX_2; 3.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 64..134
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 151..217
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 273..366
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 64..134
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 151..217
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 273..366
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 44..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 221..248
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 48..65
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 372 AA; 43913 MW; 59F2E25ACC425D08 CRC64;
MRSWSHRREL ETRDVEQEKL KVELKKLQKM KEFKPNTTLA FCQSLAQTED DKKGKKKKKD
GAETKRPSTP YILWCKDNWN EVKKENPDSY FKETSNILGA KWKTLSAEEK KEAYLQKTAL
ELLDQYLHFV QEAEQEDNNK KTKKIKDPLK PKQPISAYLI YANERRPALR EDNKSVIEVA
KLTGEEWKNL SEEQKAPYDK MAKKNKEIYL EEMEGYKRTK EEEAMSQKKE EEELMKLHKQ
EALQLLKKKE KADHIIKKKK ETTKNEDVDP NKPKKPASSF FLFWYYNTTN SQNPRCYFLT
VLKTMCLYSK DARKSLAEEH PGINNSTLTA HISLKWKELG EEERQMYNGK AAELMEAYKK
EVEEYNKTKA AA
//
