ID A0A0D3EHN4_BRAOL Unreviewed; 361 AA.
AC A0A0D3EHN4;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=U-box domain-containing protein {ECO:0000259|PROSITE:PS51698};
GN Name=106319524 {ECO:0000313|EnsemblPlants:Bo9g177290.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo9g177290.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo9g177290.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo9g177290.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
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DR RefSeq; XP_013613332.1; XM_013757878.1.
DR AlphaFoldDB; A0A0D3EHN4; -.
DR STRING; 109376.A0A0D3EHN4; -.
DR EnsemblPlants; Bo9g177290.1; Bo9g177290.1; Bo9g177290.
DR GeneID; 106319524; -.
DR Gramene; Bo9g177290.1; Bo9g177290.1; Bo9g177290.
DR KEGG; boe:106319524; -.
DR eggNOG; ENOG502QT2D; Eukaryota.
DR HOGENOM; CLU_050611_0_0_1; -.
DR OMA; NAQNANW; -.
DR OrthoDB; 403908at2759; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000032141; Chromosome C9.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR003613; Ubox_domain.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR33644:SF5; U-BOX DOMAIN-CONTAINING PROTEIN 62; 1.
DR PANTHER; PTHR33644; U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED; 1.
DR Pfam; PF04564; U-box; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51698; U_BOX; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786}.
FT DOMAIN 181..253
FT /note="U-box"
FT /evidence="ECO:0000259|PROSITE:PS51698"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 55..123
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 154..177
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 252..281
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 87..108
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 252..275
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 361 AA; 39111 MW; 29165F3364925B91 CRC64;
MSGKGLSPAS FSAPPMTVQD ADPLRFRVGE QDPKTREFAA FIGDQHRYFA AAAAAAAAAN
PHPHPHIEFR QSFYSEIGNP NDSGGSDGEE VVEEEEEEED DDDVDGNEGD GMNKDVGEDG
GGAVVGIEQD NAAYYSQQFK AMEASFVSRH EESSSVAAEN GCDVSGRRDA SSSSLSSSIE
SLRTILSDPI TGALMSDAMI LPCGHTFGAG GIEQVKQMKA CCTCSQPVSE DSITPNLTLR
VAVQAFCREE KSQSNHSSKR KREGFDQERR SFGDTAYTNR SRNRTNHFPF AVADRVIIKG
NKRTPPRFVG REAVVTTQCL NGWYVVKTLD NAESVKLQYR SLAKATEDPS TKATPSKMVS
N
//
