ID A0A0D3EK50_9ORYZ Unreviewed; 834 AA.
AC A0A0D3EK50;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=Phospholipase D {ECO:0000256|ARBA:ARBA00012027, ECO:0000256|PIRNR:PIRNR036470};
DE EC=3.1.4.4 {ECO:0000256|ARBA:ARBA00012027, ECO:0000256|PIRNR:PIRNR036470};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART01G04700.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART01G04700.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART01G04700.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART01G04700.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- FUNCTION: Hydrolyzes glycerol-phospholipids at the terminal
CC phosphodiesteric bond. {ECO:0000256|PIRNR:PIRNR036470}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = a 1,2-diacyl-
CC sn-glycero-3-phosphate + choline + H(+); Xref=Rhea:RHEA:14445,
CC ChEBI:CHEBI:15354, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:57643, ChEBI:CHEBI:58608; EC=3.1.4.4;
CC Evidence={ECO:0000256|ARBA:ARBA00000798,
CC ECO:0000256|PIRNR:PIRNR036470};
CC -!- COFACTOR:
CC Name=Ca(2+); Xref=ChEBI:CHEBI:29108;
CC Evidence={ECO:0000256|ARBA:ARBA00001913,
CC ECO:0000256|PIRNR:PIRNR036470};
CC -!- SIMILARITY: Belongs to the phospholipase D family. C2-PLD subfamily.
CC {ECO:0000256|ARBA:ARBA00010683, ECO:0000256|PIRNR:PIRNR036470}.
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DR AlphaFoldDB; A0A0D3EK50; -.
DR STRING; 65489.A0A0D3EK50; -.
DR PaxDb; 65489-OBART01G04700-1; -.
DR EnsemblPlants; OBART01G04700.1; OBART01G04700.1; OBART01G04700.
DR Gramene; OBART01G04700.1; OBART01G04700.1; OBART01G04700.
DR eggNOG; KOG1329; Eukaryota.
DR Proteomes; UP000026960; Chromosome 1.
DR GO; GO:0016020; C:membrane; IEA:InterPro.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0070290; F:N-acylphosphatidylethanolamine-specific phospholipase D activity; IEA:UniProtKB-EC.
DR GO; GO:0004630; F:phospholipase D activity; IEA:UniProtKB-EC.
DR GO; GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
DR GO; GO:0046470; P:phosphatidylcholine metabolic process; IEA:InterPro.
DR CDD; cd04015; C2_plant_PLD; 1.
DR Gene3D; 2.60.40.150; C2 domain; 1.
DR Gene3D; 3.30.870.10; Endonuclease Chain A; 2.
DR InterPro; IPR000008; C2_dom.
DR InterPro; IPR035892; C2_domain_sf.
DR InterPro; IPR001736; PLipase_D/transphosphatidylase.
DR InterPro; IPR024632; PLipase_D_C.
DR InterPro; IPR015679; PLipase_D_fam.
DR InterPro; IPR011402; PLipase_D_pln.
DR PANTHER; PTHR18896; PHOSPHOLIPASE D; 1.
DR PANTHER; PTHR18896:SF115; PHOSPHOLIPASE D ALPHA 2; 1.
DR Pfam; PF00168; C2; 1.
DR Pfam; PF12357; PLD_C; 1.
DR Pfam; PF00614; PLDc; 2.
DR PIRSF; PIRSF036470; PLD_plant; 1.
DR SMART; SM00239; C2; 1.
DR SMART; SM00155; PLDc; 2.
DR SUPFAM; SSF49562; C2 domain (Calcium/lipid-binding domain, CaLB); 1.
DR SUPFAM; SSF56024; Phospholipase D/nuclease; 2.
DR PROSITE; PS50004; C2; 1.
DR PROSITE; PS50035; PLD; 2.
PE 3: Inferred from homology;
KW Calcium {ECO:0000256|PIRNR:PIRNR036470};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|PIRNR:PIRNR036470};
KW Lipid degradation {ECO:0000256|ARBA:ARBA00022963,
KW ECO:0000256|PIRNR:PIRNR036470};
KW Lipid metabolism {ECO:0000256|ARBA:ARBA00022963,
KW ECO:0000256|PIRNR:PIRNR036470};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960}.
FT DOMAIN 13..152
FT /note="C2"
FT /evidence="ECO:0000259|PROSITE:PS50004"
FT DOMAIN 352..390
FT /note="PLD phosphodiesterase"
FT /evidence="ECO:0000259|PROSITE:PS50035"
FT DOMAIN 680..707
FT /note="PLD phosphodiesterase"
FT /evidence="ECO:0000259|PROSITE:PS50035"
SQ SEQUENCE 834 AA; 94340 MW; 21B7C1644A0C522E CRC64;
MTASEVASLT LGEEGAKSKS AAMAQMLLHG TLHATIFEAA SLSNPHRASG SAPKFIRKFV
EGIEDTVGVG KGATKVYSTI DLEKARVGRT RMITNEPINP RWYESFHIYC AHMASNVIFT
VKIDNPIGAT NIGRAYLPVQ ELLNGEEIDR WLDICDNNRE PVGESKIHVK LQYFDVSKDR
NWARGVRSTK YPGVPYTFFS QRQGCKVTLY QDAHVPDNFI PKIPLADGKN YEPHRCWEDI
FDAISNAQHL IYITGWSVYT EITLVRDSNR PKPGGDVTLG ELLKKKASEG VRVLMLVWDD
RTSVGLLKRD GLMATHDEET ENYFHGSDVN CVLCPRNPDD SGSIVQDLSI STMFTHHQKI
VVVDHELPNQ GSQQRRIVSF VGGLDLCDGR YDTQYHSLFR TLDSTHHDDF HQPNFATASI
KKGGPREPWH DIHSRLEGPI AWDVLYNFEQ RWRKQGGKDL LLQLRDLSDT IIPPSPVMFP
EDRETWNVQL FRSIDGGAAF GFPDTPEEAA KAGLVSGKDQ IIDRSIQDAY IHAIRRAKNF
IYIENQYFLG SSYAWKPEGI KPEDIGALHL IPKELALKVV SKIEAGERFT VYVVVPMWPE
GVPESGSVQA ILDWQRRTME MMYTDITEAL QAKGIEANPK DYLTFFCLGN REVKQAGEYQ
PEEQPEADTD YSRAQEARRF MIYVHTKMMI VDDEYIIIGS ANINQRSMDG ARDSEIAMGG
YQPYHLATRQ PARGQIHGFR MALWYEHLGM LDDVFQRPES LECVQKVNRI AEKYWDMYSS
DDLQQDLPGH LLSYPIGVAS DGVVTELPGM EYFPDTRARV LGAKSDYMPP ILTS
//
