GenomeNet

Database: UniProt
Entry: A0A0D3ERR4_9ORYZ
LinkDB: A0A0D3ERR4_9ORYZ
Original site: A0A0D3ERR4_9ORYZ 
ID   A0A0D3ERR4_9ORYZ        Unreviewed;       229 AA.
AC   A0A0D3ERR4;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   18-SEP-2019, entry version 28.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
OS   Oryza barthii.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART01G24330.1, ECO:0000313|Proteomes:UP000026960};
RN   [1] {ECO:0000313|EnsemblPlants:OBART01G24330.1, ECO:0000313|Proteomes:UP000026960}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART01G24330.1};
RA   Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA   Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA   Knight J., Niazi F., Egholm M., Wing R.A.;
RT   "De Novo Next Generation Sequencing of Plant Genomes.";
RL   Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OBART01G24330.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART01G24330.1};
RA   Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA   Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA   Knight J., Niazi F., Egholm M., Wing R.A.;
RT   "De Novo Next Generation Sequencing of Plant Genomes.";
RL   Rice 2:35-43(2009).
RN   [3] {ECO:0000313|EnsemblPlants:OBART01G24330.1, ECO:0000313|Proteomes:UP000026960}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART01G24330.1};
RX   DOI=10.1007/s12284-009-9025-z;
RA   Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA   Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA   Knight J., Niazi F., Egholm M., Wing R.A.;
RT   "De novo next generation sequencing of plant genomes.";
RL   Rice 2:35-43(2009).
RN   [4] {ECO:0000313|EnsemblPlants:OBART01G24330.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC       ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
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DR   STRING; 65489.OBART01G24330.1; -.
DR   EnsemblPlants; OBART01G24330.1; OBART01G24330.1; OBART01G24330.
DR   Gramene; OBART01G24330.1; OBART01G24330.1; OBART01G24330.
DR   Proteomes; UP000026960; Chromosome 1.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   SMART; SM00340; HALZ; 1.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000026960};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026960}.
FT   DOMAIN       73    133       Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT   DNA_BIND     75    134       Homeobox. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00108}.
FT   REGION        1     82       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   REGION      198    229       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COILED      146    166       {ECO:0000256|SAM:Coils}.
FT   COMPBIAS     14     37       Polar. {ECO:0000256|SAM:MobiDB-lite}.
FT   COMPBIAS     64     82       Polyampholyte. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
SQ   SEQUENCE   229 AA;  25092 MW;  5E9A00332FEB7ACB CRC64;
     MGATSPSGLE LTMAVPGLSS SSGSEGAGCN NNNAGGGCNM RDLDINQPAS GGEEEEFPMG
     SVEEDEEERG IGGPHRPKKL RLSKEQSRLL EESFRLNHTL TPKQKEALAI KLKLRPRQVE
     VWFQNRRART KLKQTEMECE YLKRCFGSLT EENRRLQREV EELRAMRVAP PTVLSPHTRQ
     PLPASALTMC PRCERITAAT GPPAVRPPPS SAAAAAPSPF HPRRPSAAF
//
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