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Database: UniProt
Entry: A0A0D3ESL3_9ORYZ
LinkDB: A0A0D3ESL3_9ORYZ
Original site: A0A0D3ESL3_9ORYZ 
ID   A0A0D3ESL3_9ORYZ        Unreviewed;      1432 AA.
AC   A0A0D3ESL3;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   12-SEP-2018, entry version 16.
DE   RecName: Full=DNA ligase {ECO:0000256|RuleBase:RU000617};
DE            EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};
OS   Oryza barthii.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART01G26860.1, ECO:0000313|Proteomes:UP000026960};
RN   [1] {ECO:0000313|EnsemblPlants:OBART01G26860.1, ECO:0000313|Proteomes:UP000026960}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART01G26860.1};
RA   Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA   Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA   Knight J., Niazi F., Egholm M., Wing R.A.;
RT   "De Novo Next Generation Sequencing of Plant Genomes.";
RL   Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OBART01G26860.1, ECO:0000313|Proteomes:UP000026960}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART01G26860.1};
RX   DOI=10.1007/s12284-009-9025-z;
RA   Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA   Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA   Knight J., Niazi F., Egholm M., Wing R.A.;
RT   "De novo next generation sequencing of plant genomes.";
RL   Rice 2:35-43(2009).
RN   [3] {ECO:0000313|EnsemblPlants:OBART01G26860.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
CC   -!- CATALYTIC ACTIVITY: ATP + (deoxyribonucleotide)(n)-3'-hydroxyl +
CC       5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) +
CC       AMP + diphosphate. {ECO:0000256|RuleBase:RU000617}.
CC   -!- SIMILARITY: Belongs to the ATP-dependent DNA ligase family.
CC       {ECO:0000256|RuleBase:RU004196}.
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DR   EnsemblPlants; OBART01G26860.1; OBART01G26860.1; OBART01G26860.
DR   Gramene; OBART01G26860.1; OBART01G26860.1; OBART01G26860.
DR   OrthoDB; EOG093607RC; -.
DR   Proteomes; UP000026960; Chromosome 1.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0071897; P:DNA biosynthetic process; IEA:InterPro.
DR   GO; GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR   Gene3D; 1.10.3260.10; -; 2.
DR   Gene3D; 3.60.15.10; -; 2.
DR   InterPro; IPR000977; DNA_ligase_ATP-dep.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR016059; DNA_ligase_ATP-dep_CS.
DR   InterPro; IPR012308; DNA_ligase_ATP-dep_N.
DR   InterPro; IPR036599; DNA_ligase_N_sf.
DR   InterPro; IPR011084; DRMBL.
DR   InterPro; IPR001279; Metallo-B-lactamas.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR   InterPro; IPR015940; UBA.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF04675; DNA_ligase_A_N; 1.
DR   Pfam; PF07522; DRMBL; 1.
DR   SMART; SM00849; Lactamase_B; 1.
DR   SUPFAM; SSF117018; SSF117018; 1.
DR   SUPFAM; SSF50249; SSF50249; 2.
DR   SUPFAM; SSF56281; SSF56281; 1.
DR   TIGRFAMs; TIGR00574; dnl1; 1.
DR   PROSITE; PS00697; DNA_LIGASE_A1; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
DR   PROSITE; PS50030; UBA; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|RuleBase:RU000617};
KW   Complete proteome {ECO:0000313|Proteomes:UP000026960};
KW   DNA damage {ECO:0000256|RuleBase:RU000617};
KW   DNA recombination {ECO:0000256|RuleBase:RU000617};
KW   DNA repair {ECO:0000256|RuleBase:RU000617};
KW   DNA replication {ECO:0000256|RuleBase:RU000617};
KW   Ligase {ECO:0000256|RuleBase:RU000617};
KW   Nucleotide-binding {ECO:0000256|RuleBase:RU000617};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026960}.
FT   DOMAIN      648    691       UBA. {ECO:0000259|PROSITE:PS50030}.
FT   DOMAIN     1092   1237       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   1432 AA;  159002 MW;  44E86A624205402D CRC64;
     MAYLFSSPDS KSLSVATSTL FLSSLASLPS PHSEPPSASA ASPLSPVPAS VPPTALIPGS
     RFLVDAFRHA GDFTASYFLS HFHSDHYTGL GPSWRRGLVF CSPLTARLLV SVLSVPPQLV
     VVLDAGVRVT VDGWCVVAVD ANHCPGAVQF LFRSSGPNAE RYVHTGDFRF SQSMITEPNL
     LEFIGADAVF LDTTYCNPKF TFPPQKESLE YVVNSIKRVK EESRASGERV LCLIATYVVG
     KERILLEVAR RCGCKIHVDS RKMEILTLLG IGGEDGVFTE DAAATDVHVT GWNILGETWP
     YFRPNFVKMK EIMVERGYNK AVGFVPTGWM YETKKEGFAV RTKDSLEIHL VPYSEHSSYD
     ELRDYVKFLH PKRVIPTVGL DGGKPDSKEA FALQKHFAGL VDETANKQEF LMAFHRSSRN
     ATLGPEDAVT GLSQQEGEVQ ELEEATLLPA SLAFERSDSF QEKITVEMKK ELSDFLPSWV
     SQDLILDLLI KSGGDVVQAA TDFFEKERDF FEEANVYNSE TPKSEIDLSS DHGSSADASS
     QQEVPLFSQK PMDHSSKLLN LNAMRMKSNL SKRERKRGSN SADKPKKKGR STAFKPLTES
     SGRKQSTITN YFARTMLAAS KSDTSDKVTV DTNQNNVRND DQFTEVVESE KQSVSQLLQI
     VDGGMSRESA ISLLEKAKGD VNVAVDIFYS KTDNSNVLEN DMNIVTQNTE NEMTDKSSST
     GLLRNSSEDT PKMPNLCVQS YVAQADSVCI SLPIEKYLPI EHACWTAGQP APYLHLARTF
     DLVEREKGKI KTTAMLCNMF RSLLALSPDD VLPAVYLCTN KISPDHENIE ALGSSRSKIH
     EMYKTFGDLG DVAQECRQNQ MLLAPPRPLS IRDVFSTLRK LREMEMKFLV RTLVRNLRIG
     VMMKTILPAL AHAVVIDGKY SNSPVLSLEG IKPQLQELST EVAEAYNVIP NLDLLIPSLL
     REGTAFSASS LAMITGTPIP PMLARITNGL TQSLKLFNGR AFTCEYKYDG QRAQIHRSND
     GSVQIFSRQM KESTSRFPDL VGMIKELCSI EVSSFILDAE VVGIDRKKGN KLMSFQELSS
     RERGSKHSSI AIQNIKVDIC VFVFDIMFCN GQSLLNCSLR QRRKYIHDLF QEKPGHFELA
     QQLTVEADEA SVDNSTTLER MNTFFKMACQ SSCEGIMLKI LDVDAGYSAS KRCDSWLKVK
     RDYVGLGDSL DLVPIGAWYG NGRKAGWYSP FLMACYNPEY EEFQSVCRVM SGFSDEFYKE
     PQPAAALADC RRCAQRPAAG GLPLLDCSAC RCATSCSPML SPVVTHQLDA GSTPPIARDG
     ESMEMMKEFY SGDRILPKKP VYYKTDELPE LWFSAEQVWE IRGADLTLSP VHHAAIGLVH
     PSRGISVRMP RYIRSRPDRS PEDCSTATDV ASLFKAQTRK MEVSSDGQDT SH
//
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