ID A0A0D3F113_9ORYZ Unreviewed; 2009 AA.
AC A0A0D3F113;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=TATA-binding protein-associated factor BTAF1 {ECO:0008006|Google:ProtNLM};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART02G04690.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART02G04690.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART02G04690.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART02G04690.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR STRING; 65489.A0A0D3F113; -.
DR PaxDb; 65489-OBART02G04690-1; -.
DR EnsemblPlants; OBART02G04690.1; OBART02G04690.1; OBART02G04690.
DR Gramene; OBART02G04690.1; OBART02G04690.1; OBART02G04690.
DR eggNOG; KOG0392; Eukaryota.
DR HOGENOM; CLU_000315_1_1_1; -.
DR Proteomes; UP000026960; Chromosome 2.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR CDD; cd17999; DEXHc_Mot1; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 3.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000357; HEAT.
DR InterPro; IPR021133; HEAT_type_2.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR044972; Mot1.
DR InterPro; IPR044078; Mot1_ATP-bd.
DR InterPro; IPR022707; Mot1_central_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR36498; TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172; 1.
DR PANTHER; PTHR36498:SF1; TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172; 1.
DR Pfam; PF12054; DUF3535; 1.
DR Pfam; PF02985; HEAT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS50077; HEAT_REPEAT; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 1262..1297
FT /note="HEAT"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00103"
FT DOMAIN 1432..1601
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1784..1941
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 231..268
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 364..411
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1954..1976
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 231..249
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 364..382
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 394..410
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1954..1968
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2009 AA; 222231 MW; 30F9355B95554C76 CRC64;
MCAGSTQATR FAAARQIGEI AKSHPQELNV LLKKVSPYLR SKNWDTRVAA AHAIGAIAEN
VKHTSVKDLF ASAETEKHAS GLSGGIGDVG STLRHADTTA TSELAFGSFD INRVLEFGSP
LLASGGQEYD IANDNGKNPA ERLARQKQNL RRRLGLDVCE QFMDFNDVIK DEDLLAQKNY
WGANMQNNGF YSFNTGQHIQ HLVASMVPRY PKHSNFRSRR LSARELNMLK RKAKSNAKDH
TKAVPEDDDV VPKSSGPSNG ASSDQDTVDA ITDEDNLEYS ENGRWPFQQF VDQLIHDMFD
PIWEVRHGTI MALREILTHQ GACAGVYFPD LNSPFADLDD KNNLDSLKRA HGIDLNEDID
SGQLEPVLKR QKKEESNPEV MDIQLDKEPS NGDYSKTEAS LSTEPTVSSG EPNLAHAKVE
SPFQVDGSAN PSKVDPYCTP PHETLNSMPK LSSTHLPENS KFIKLMKLAN YSAVKNWEFL
QDCAIRFLCV LSLDRFGDYV SDQVVAPVRE TCAQALGAVL KYMHPTLRRQ EWEVRHGSLL
GIKYLVAVRQ EMLKDLLNYV LHACKAGLED PDDDVRAVAA EALIPAAASL VRLNDQMLHS
IVMLLWDILL DLDDLSPSTS SVMNLLAEIY SQPEMVPKML GTTAIGEDNE FDLNSVTLVA
GEEKMGSNDN PYVLATLTPR LWPFMRHSIT SVRRSAVRTL ERLLEVGNTR NSAKLWLASI
LGDALQVVFQ NLLLESNDEI IRSSERAWKL LLQCPTEDLE CAASSYFSNW VQLATTPYGT
ALDSAKMFLP VALPRGSRSR AAAKIKSARL EHENTRMISF GSTGENTSQE KHSEASLSVS
KIIVGSDSDK SVTHTRVLTS MALGLFASKL PEGSWQVVLG PLASDLMSLS GVQRQVASMV
IVSWFKDLRK SDPAVVGTLL AFLSSLKGWM LDLLACSDPS FPTKDSPLPY AELARTYRKM
RNEANNLFQS IESCALLKEY TSNLNFEADM LSVDDAINFA SKLLLPSEPD FSLDSDKIVL
NNIESAKQGL LSTSGYLKCV QNNLHVTVSS LVASAVVWMA GLPSKLNPVI LPLMAAVKRE
QEEILQDKAA DALAELIFSC VGRKPGPNDK LTKNLCTLTC TDASETPQAA VINSIQVIED
QNLLSIGKRF SNHKSRGQMT SGGESKSEGF ISRRGSELAF KHLCEKFGAS LFEKLPKLWD
CLTEFLKPVK TGDDLMKEDP SIAQLGRSCE DKEPQSLINN IQVVRSVTPH LAEPLRPQLL
SLLPCILGCV RHPHVAVRLA AARCITSMAK SLTANVMVIV IENVIPMLSD SSSVCARQGA
GMLLSLLVQG LAVELVPYAP FLVVPLLRCM SDPDGSVRQT VTHSFAALVP LLPLAKGSLL
PDGLSERLSS SAEDAQFLEQ LLDNSQIDDY KLSIDLSVEL RRYQQEGINW LAFLRRFKLH
GILCDDMGLG KTLQASAIVA ADIAESRARN DEQDPKSLII CPSTLVAHWE YEIEKYIDSS
IMKPLQYIGS SQDRIILRSQ FDKFNVIITS YDIIRKDIDF LENVFWNYCV LDEGHIIKNS
RSKITSAVKQ LKAQHRLILS GTPIQNNVLE LWSLFDFLMP GFLGTEKQFQ ATYGKPLLAA
KDPKCSAKDA EAGILAMEAL HKQVMPFLLR RTKDEVLSDL PEKIIQDRYC NLSLLQLKLY
DKFSNSNAKQ EISTIVKENE LEQSTSQPKA TRHVFQALQY LLKLCSHPLL VTGESPPDYL
VDLLKEIGMG TGDELHDLHH SPKLVALQEI LQECGIGSEI SSPDASAAIG QHRVLIFAQH
KALLDIIEKD LFQSHMRSVT YLRLDGSVEP EKRFEIVKAF NSDPTIDVLL LTTHVGGLGL
NLTSADTLVF MEHDWNPMKD LQAMDRAHRL GQRKVVNVHR LIMRGTLEEK VMSLQRFKVS
VANAVINAEN ASLKTMNTDQ LLDLFASTPA SRKASVLPSS SGGDQSKDSK GKSGGKGLKS
ILNGLDELWD QSQYADEYDL NQFLAKLNG
//
