ID A0A0D3F641_9ORYZ Unreviewed; 871 AA.
AC A0A0D3F641;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=Myb-like domain-containing protein {ECO:0000259|PROSITE:PS50090};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART02G19580.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART02G19580.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART02G19580.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART02G19580.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3F641; -.
DR STRING; 65489.A0A0D3F641; -.
DR PaxDb; 65489-OBART02G19580-1; -.
DR EnsemblPlants; OBART02G19580.1; OBART02G19580.1; OBART02G19580.
DR Gramene; OBART02G19580.1; OBART02G19580.1; OBART02G19580.
DR eggNOG; KOG1137; Eukaryota.
DR eggNOG; KOG4282; Eukaryota.
DR HOGENOM; CLU_008727_0_0_1; -.
DR Proteomes; UP000026960; Chromosome 2.
DR GO; GO:0009507; C:chloroplast; IEA:EnsemblPlants.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:EnsemblPlants.
DR GO; GO:0004519; F:endonuclease activity; IEA:EnsemblPlants.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0060918; P:auxin transport; IEA:EnsemblPlants.
DR GO; GO:0009658; P:chloroplast organization; IEA:EnsemblPlants.
DR GO; GO:0009942; P:longitudinal axis specification; IEA:EnsemblPlants.
DR GO; GO:0009416; P:response to light stimulus; IEA:EnsemblPlants.
DR CDD; cd12203; GT1; 1.
DR CDD; cd07714; RNaseJ_MBL-fold; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.10710; Metallo-hydrolase/oxidoreductase; 1.
DR Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR InterPro; IPR001279; Metallo-B-lactamas.
DR InterPro; IPR044822; Myb_DNA-bind_4.
DR InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR InterPro; IPR011108; RMMBL.
DR InterPro; IPR042173; RNase_J_2.
DR InterPro; IPR001005; SANT/Myb.
DR PANTHER; PTHR43694; RIBONUCLEASE J; 1.
DR PANTHER; PTHR43694:SF1; RIBONUCLEASE J; 1.
DR Pfam; PF12706; Lactamase_B_2; 1.
DR Pfam; PF13837; Myb_DNA-bind_4; 1.
DR Pfam; PF07521; RMMBL; 1.
DR SMART; SM00849; Lactamase_B; 1.
DR SMART; SM00717; SANT; 1.
DR SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
DR PROSITE; PS50090; MYB_LIKE; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 772..836
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT REGION 26..60
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 647..715
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 43..60
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 647..668
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 669..698
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 699..714
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 871 AA; 96127 MW; EDDA70943D676F95 CRC64;
MVALASLSSL SPCGLARRRS SSSAASISCC AAPPPPSAKG SQESRTPRRR VRKTEGATKS
LEDSVKRKME QFYEGLDGPP LRVLPIGGLG EIGMNCMLVG NYDRYILIDA GVMFPDFDEF
GVQKIIPDTT FIKKWSHKIE AVIITHGHED HIGALPWVIP ALDSSTPIFA SSFTMELIKR
RLKEFGIFLS SRLKVFRVRK RFQAGPFEVE PLRVTHSIPD CCGLVLRCAD GIIFHTGDWK
IDESPVDGKI FDRQALEELS KEGVTLMMSD STNVLSPGRS ISESVVAGSL LRHISEAKGR
VITTQFASNI HRIGSIKAAA DLTGRKLVFV GMSLRTYLDA AFRDGKSPID PSTLVKVEDM
DAYAPNDLLV VTTGSQAEPR AALNLASFGG SHALKLSKED VLLYSAKVIP GNESRVMKML
NRLTELGPKI VMGKDAGLHT SGHAYHDELE EVLQIVKPQH FLPVHGELLF LKEHELLGRS
TGIRHTTVIK NGEMLGVSHL RNRRVLSNGF VALGKEDLRL MYSDGDKAFG TSTDLCIDER
LRIASDGVIF VSMEIFRPQK ELASSQSGLK GKFKITTRCL WLDNGRLLDA LYKAAYAALS
SCPVNCPLSH MERMVSEILR KMVRKYSGKR PDVIVVATEN TTVSFVEDSE TKSSGKFGSF
SAPRHSSRSS GRSLEESDKS RPENTEGEAK ENLPDVLRTT RDDATTSSNG EAFFSSDLHK
PKTLEHFWDS FKSPTAVKIA RIVNGSAQGS KSKIGKISIV GKDSSNPSSA PVKSSKKNKW
KPEEIKSLIQ MRGEMNEQFQ TVKGRMVLWE EISSSMLSQG ISRTPAQCKS LWTSLVQKYE
ESKKDEESVK TWPYFLDMDR VLSSQGEMAT Q
//
