ID A0A0D3FIK2_9ORYZ Unreviewed; 521 AA.
AC A0A0D3FIK2;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=Pre-mRNA processing factor 4 (PRP4)-like domain-containing protein {ECO:0000259|SMART:SM00500};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART03G17590.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART03G17590.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART03G17590.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART03G17590.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR AlphaFoldDB; A0A0D3FIK2; -.
DR STRING; 65489.A0A0D3FIK2; -.
DR PaxDb; 65489-OBART03G17590-1; -.
DR EnsemblPlants; OBART03G17590.1; OBART03G17590.1; OBART03G17590.
DR Gramene; OBART03G17590.1; OBART03G17590.1; OBART03G17590.
DR eggNOG; KOG0272; Eukaryota.
DR HOGENOM; CLU_000288_57_20_1; -.
DR Proteomes; UP000026960; Chromosome 3.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 4.10.280.110; Pre-mRNA processing factor 4 domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR014906; PRP4-like.
DR InterPro; IPR036285; PRP4-like_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19846:SF0; SFM DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR19846; WD40 REPEAT PROTEIN; 1.
DR Pfam; PF08799; PRP4; 1.
DR Pfam; PF00400; WD40; 7.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00500; SFM; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF158230; PRP4-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 3.
DR PROSITE; PS50082; WD_REPEATS_2; 7.
DR PROSITE; PS50294; WD_REPEATS_REGION; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 93..146
FT /note="Pre-mRNA processing factor 4 (PRP4)-like"
FT /evidence="ECO:0000259|SMART:SM00500"
FT REPEAT 224..265
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 266..300
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 307..348
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 349..390
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 391..432
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 433..475
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 476..517
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 1..72
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..51
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 54..72
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 521 AA; 58210 MW; 897B7BD56DD6BF3E CRC64;
MENPRPQAPA GTPPMAPLPV PLTIAPSQPR LREPPRPPRP PPLPSPPPPR QEEEGAAAEY
EVSDDHRAAR ERHERAVQEL LQRRRAFAMA VPTNDSAVRA RLRRLGEPVT LFGEREMERR
DRLRALMVRL EADGHLDRLL RAQEEEQGAA GAEEEEEQIQ YPFFTEGTQE LLKARVDIAQ
YSLPRAKARI ERAKRRHDDP DEDPEAEANL VVKQAEDFVL ECSEIGDDRP LTGCSFSRDA
SMLATSSWSG MIKVWSMPQV TKIATLKGHT ERATDVAFSP VDDCLATASA DKTAKLWKID
GSLLMSFDGH LDRLARLAFH PSGGYLATAS FDKTWRLWDV STGKELLLQE GHSRSVYGVS
FHPDGSLAAS CGLDAYARVW DLRSGRLWGT LMGHVKPVLG VSFSPNGFLV ATGSEDNFCR
IWDLRTKRML YSIPAHKSLI SHVKFEPQEG YYLATSSYDT KAALWSARDY KPIKSLVGHE
SKVTSLDISG DGQQIVTVSH DRTIKIWSCR SRAQDNAMEL D
//
