ID   A0A0D3FLA3_9ORYZ        Unreviewed;       662 AA.
AC   A0A0D3FLA3;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   27-MAR-2024, entry version 30.
DE   RecName: Full=DNA polymerase kappa {ECO:0000256|ARBA:ARBA00016178};
OS   Oryza barthii.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART03G26080.1};
RN   [1] {ECO:0000313|EnsemblPlants:OBART03G26080.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART03G26080.1};
RX   DOI=10.1007/s12284-009-9025-z;
RA   Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA   Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA   Knight J., Niazi F., Egholm M., Wing R.A.;
RT   "De novo next generation sequencing of plant genomes.";
RL   Rice 2:35-43(2009).
RN   [2] {ECO:0000313|EnsemblPlants:OBART03G26080.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   AlphaFoldDB; A0A0D3FLA3; -.
DR   STRING; 65489.A0A0D3FLA3; -.
DR   PaxDb; 65489-OBART03G26080-1; -.
DR   EnsemblPlants; OBART03G26080.1; OBART03G26080.1; OBART03G26080.
DR   Gramene; OBART03G26080.1; OBART03G26080.1; OBART03G26080.
DR   eggNOG; KOG2094; Eukaryota.
DR   HOGENOM; CLU_012348_11_1_1; -.
DR   Proteomes; UP000026960; Chromosome 3.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR   GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd03586; PolY_Pol_IV_kappa; 1.
DR   Gene3D; 1.10.150.810; -; 2.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 3.40.1170.60; -; 1.
DR   Gene3D; 3.30.1490.100; DNA polymerase, Y-family, little finger domain; 1.
DR   HAMAP; MF_01113; DNApol_IV; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR036775; DNA_pol_Y-fam_lit_finger_sf.
DR   InterPro; IPR017961; DNA_pol_Y-fam_little_finger.
DR   InterPro; IPR022880; DNApol_IV.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR041298; UBZ3.
DR   InterPro; IPR001126; UmuC.
DR   PANTHER; PTHR11076:SF33; DNA POLYMERASE KAPPA; 1.
DR   PANTHER; PTHR11076; DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; 1.
DR   Pfam; PF00817; IMS; 1.
DR   Pfam; PF11799; IMS_C; 1.
DR   Pfam; PF18439; zf_UBZ; 1.
DR   PIRSF; PIRSF036603; DPol_eta; 3.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF100879; Lesion bypass DNA polymerase (Y-family), little finger domain; 1.
DR   PROSITE; PS50173; UMUC; 1.
DR   PROSITE; PS51907; ZF_UBZ3; 1.
PE   3: Inferred from homology;
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT   DOMAIN          103..283
FT                   /note="UmuC"
FT                   /evidence="ECO:0000259|PROSITE:PS50173"
FT   DOMAIN          574..611
FT                   /note="UBZ3-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51907"
FT   REGION          519..545
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          611..645
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   662 AA;  73754 MW;  1514104EFB650F53 CRC64;
     MAGTPPDGGG DRPWESYHTA YTNAKAGMEG VDKEKVQKVI YEMSKGSKYF ENEQRKEAIT
     KQKIDHLRAQ CAKLTDNDIS HFQKVAEHKI LELEASRDLS KIWLHTDMDA FYATVEILEN
     PSLKGKPLAV GSMSMIATAS YEARKFGVRA AMPGFIGCKL CPELVFVRPN FERYTYYSEL
     TRKVFQRYDP NFVATSLDEA YLNITKVCFD RGITGEEVAT ELRGAIHQET GLTCSAGVAP
     NRMIAKVCSD INKPNGQFIL PNDQEAVTTF VSTLPIRKIG GIGKVTEQML RQVLGISTCQ
     EMLQKASFLC ALFSESSADF FISVGLGLGG TETPEQRLRK SISCERTFRA TDDCSMLFEK
     LDSLADNLAD DMQKECLKGR TLTLKLKTAA FEVRTRAVTT QNYINSKEDI LIYARKLLKA
     ELPLSLRLMG LRMSQLRDEK DDSSTQTQKT LDRFFRTPDN SNVIGANSPS IGNTTGGDNY
     CTNVMTKVDY LEHDSMDDQA LFLHEKNLFV PEGRSSDNYN NDAASSNPLM CDGVGGKELD
     DDSSSLKGTH TVKFDGQLTS SNATTSSSKP DQLFWINGYI CSICGFELPP GFEEERQEHS
     DFHLAEMLQQ EEAVDSTGPL SKERLAERPC SSTPTPKKKL KSSKEGKHIP IDAFFHKVNK
     NL
//