ID A0A0D3G0J3_9ORYZ Unreviewed; 1760 AA.
AC A0A0D3G0J3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=BED-type domain-containing protein {ECO:0000259|PROSITE:PS50808};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART04G26300.2};
RN [1] {ECO:0000313|EnsemblPlants:OBART04G26300.2}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART04G26300.2};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART04G26300.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the disease resistance NB-LRR family.
CC {ECO:0000256|ARBA:ARBA00008894}.
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DR STRING; 65489.A0A0D3G0J3; -.
DR PaxDb; 65489-OBART04G26300-2; -.
DR EnsemblPlants; OBART04G26300.2; OBART04G26300.2; OBART04G26300.
DR Gramene; OBART04G26300.2; OBART04G26300.2; OBART04G26300.
DR eggNOG; KOG4658; Eukaryota.
DR HOGENOM; CLU_000837_8_4_1; -.
DR Proteomes; UP000026960; Chromosome 4.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR GO; GO:0051707; P:response to other organism; IEA:UniProt.
DR Gene3D; 1.20.5.4130; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 3.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR022149; DUF3681.
DR InterPro; IPR006553; Leu-rich_rpt_Cys-con_subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR041118; Rx_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR PANTHER; PTHR23155; DISEASE RESISTANCE PROTEIN RP; 1.
DR PANTHER; PTHR23155:SF1149; OS11G0429100 PROTEIN; 1.
DR Pfam; PF12442; DUF3681; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF18052; Rx_N; 1.
DR PRINTS; PR00364; DISEASERSIST.
DR SMART; SM00367; LRR_CC; 6.
DR SMART; SM00614; ZnF_BED; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR SUPFAM; SSF52058; L domain-like; 3.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50808; ZF_BED; 1.
PE 3: Inferred from homology;
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Plant defense {ECO:0000256|ARBA:ARBA00022821};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00027}.
FT TRANSMEM 32..54
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 66..90
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 102..119
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 253..311
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT REGION 222..256
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 299..326
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 310..325
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1760 AA; 196870 MW; 6E21678384F9705B CRC64;
MGTQDMDLPE FLLKILRPIT DACLDDDKLP GALISCGVLQ AAAALSLVFF IAPSGVFGHH
GKALHWLYYG SLVTVVLVGF VEASLGFWVA GDVVNRRAVG RTMLLVCLFS LIFVVAIWGS
EVEVGLLEGG IGWLAETILE NLDADKLDDW IRQVGLADDT KKLRSEIEMV EAVVAAAKGR
AIRNKPLFRS LGRVRELLYD ADDAVDELDY FRLQQQVQGG SWQSATETLD EHGALQPERP
SSNAAIASGS GGNKRSKAWG HFDITEEENG KPLKARCIHC HTVVRCTSDK GTSVLHNHLK
SDSCKKKRQA TDQQPNPSSI AEATANGISV ELGGSGSRKR MRITDESTQN SVAGELSWNK
AECSIRIKQI IRELQDARGA VSGILKLQGP DLVGNSNHHT STTTILCRRT SSLSPCKIYG
RDTEKNTIME IITVDSYDGV TVVPIVGIGG AGKTALAQLV YNDPIVGRQF QHNIWVCVSQ
DFNEMRLTRE MLDFICKEKY EGLCSFANVQ ETLMTNIKSK RFLLILDDVW DNVNIFQWNK
LLVPLKSNSA KGNVILVTTR SMSVANMIGT VNAIKLGALE KEYFWQLFRA CAFGDEKYEA
HKCLSTIAQQ ISDKLKGNPL AAETAGELLC RNRNVDRWNN VLKNEDWKSL QLSGGIMSSL
KLSYDQLHSH LQRCFLYCSI FPINYRFVGA ELVRIWTSQG FIKCSHSNKM LEEIGQGYLS
DLVNLGFFEL VEREESTLGD QTSYAMCGLM HDFARIISRT GEYTVIDGLH CNKIVPTVRH
LTIVIDSEYH TDPCNEKFEK IINNAAVSLR NLRTLVLIVK SAFSFSQSFK DIVLKAQKLR
LLQVCSEQTY NYMDMLLRNL YNNFDPLLCN LVNLTHIRYM KIDSKTLPQS LSKFYHLQVL
DSGSNLTMPN DMENLVSLQH LVAPEQIYMS IASISGMTAL QELHSFNVHV ASSSEITLLQ
SMNQLVQFGV SQLENITSGA EACGARLRDK QNLETLRLFW SDYLPQDKCE NARDVLEGLE
PRKNLKDLQI SGYNGATSPS WLATSLTSLQ TLHLERCAQW QILPSLERFP FLRKVELRSM
QNVVQISIPS LDELMLIDMP KLERCSCSSI RDLNYSLRVL NIKHCPVLKV FPLFDNCQHF
EIEQISWLPH LSKLTIHACP DLHVHNPLPP STIVSKLSIS GVSTLPSMKG SSNGTLTIGL
PDVDDDDDFD DIFCEDINQL ITLDDKVMSF HNLRFLTRLI ISGCQNLTSI SFKGVRQLVC
LKSLKLGNCP ELLSSDVPQE LTCEYMSGSN QSALPSLERL HIEYCGTTGK WLSLMLQHAQ
ALQELSLNGC KQITGLSIGE EENSQPNLIS ATGAASLGYP GRDKLLRLPL NLLSSLKRVS
IGWCNDLTFY SSKEDFAGFT SLEEIVILAC PKLLSSLTHN DGSDEQSNGR WFLPLSLGEL
QVGNIDSLKT FQPCFPGNLT SLKKLEVRSN RSLTSLQLHF CTALQELIIE NCKSLNSLEG
LQSLGNLRLL RADRCLSDYG EYGRCILPQS LEGLYIREYS QEILQPCFQT NLTCLKRLEV
SGTGNLKSLE LQSCTALEHL KIEGCSSLAT LEGLRFLHTL RHLKVHRCPR LPPYFESLSG
QGYELCPRLE RLEINYPSIL TTSFCKNLTS LQYLELCSHG LEMERLTDEE ERALQLLTSL
QELRFNCCYN LVDLPTGLHN LPSLKRLEIW NCGSIARLLE KGLPPSLEEL AIVDCSNELA
QQCRLLASKR KVKINQRYVN
//
