ID A0A0D3G0R0_9ORYZ Unreviewed; 837 AA.
AC A0A0D3G0R0;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE RecName: Full=Protein SDA1 {ECO:0000256|RuleBase:RU365057};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART04G26850.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART04G26850.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART04G26850.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART04G26850.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- FUNCTION: Required for 60S pre-ribosomal subunits export to the
CC cytoplasm. {ECO:0000256|RuleBase:RU365057}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|RuleBase:RU365057}.
CC -!- SIMILARITY: Belongs to the SDA1 family.
CC {ECO:0000256|RuleBase:RU365057}.
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DR AlphaFoldDB; A0A0D3G0R0; -.
DR STRING; 65489.A0A0D3G0R0; -.
DR PaxDb; 65489-OBART04G26850-1; -.
DR EnsemblPlants; OBART04G26850.1; OBART04G26850.1; OBART04G26850.
DR Gramene; OBART04G26850.1; OBART04G26850.1; OBART04G26850.
DR eggNOG; KOG2229; Eukaryota.
DR HOGENOM; CLU_009161_1_0_1; -.
DR Proteomes; UP000026960; Chromosome 4.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR GO; GO:0042273; P:ribosomal large subunit biogenesis; IEA:UniProtKB-UniRule.
DR GO; GO:0000055; P:ribosomal large subunit export from nucleus; IEA:UniProtKB-UniRule.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027312; Sda1.
DR InterPro; IPR048292; SDA1_C.
DR InterPro; IPR012977; SDA1_N.
DR PANTHER; PTHR12730; HSDA/SDA1-RELATED; 1.
DR PANTHER; PTHR12730:SF0; PROTEIN SDA1 HOMOLOG; 1.
DR Pfam; PF21638; SDA1_C; 1.
DR Pfam; PF08158; SDA1_HEAT; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|RuleBase:RU365057};
KW Protein transport {ECO:0000256|RuleBase:RU365057};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW Ribosome biogenesis {ECO:0000256|RuleBase:RU365057};
KW Transport {ECO:0000256|RuleBase:RU365057}.
FT DOMAIN 88..461
FT /note="SDA1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF08158"
FT DOMAIN 790..835
FT /note="SDA1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF21638"
FT REGION 1..42
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 488..660
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 720..746
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 758..837
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 518..537
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 571..640
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 641..659
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 758..781
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 792..807
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 814..837
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 837 AA; 93940 MW; 1689179AD2FA9B29 CRC64;
MPRQHAPAFT PEAASASATG GAGERQSLPA LQAKMKRDPE GYEEELRQLR RHFESSVFLF
RQQAALASTS SSGGGGEVAK ELGDLALFLA HVAPFYPDDL ADLPDQIGGL LDTNARALPS
GLRVHLVQAL ILLVNRKIVD LEDTMELFME LQVIGDRAVK KLAFSHIVHS IRRMNQTHKN
EARNRKLQNI LFTFLQGEEE SRAKRAFTIL CDLHRRRVWF DDRTANAICN ACFHGSSRIM
IAAISFLLGY ENVEQEDDSD ASSSEDEAQN PQIILSKEDV YKANHKGTAA TKKKKKAKLQ
RVIRSMKRQQ RKSTEDTGSN YYSPLTYLKD PQGFAEKLFS RLQKCNERFE VRMMMLKVIA
RTIGLHHLVL LNFYPYLQRY VQPHQRDVTT LLAAAVQACH DMVPPDAVEP LFKQIVNQFV
HDRSRPEAIA VGLNVVREIC MRIPLLMNED LLQDLVLYKK SHEKAVSIAA RSLITLFREI
CPSLLVKKDR GRPADPKARP KAFGEATIAS DVPGAELLDE DFSSEGEGSD DASDAFDSND
EKELQSARGT KQNLDGSSEA NKLDTDEGMK EEDQLSGDED DTEELDEDQD ISDNDSEEND
DELECDSDMD EENDVSESDD DEELSEKLDD SDEGSDQDDD SDQDDKSKNS SRKANKRKLS
DYIGQLNAAD ASLRALKKLA GAKKAEASCD EAGKILSDED FKRIKELKAK KEAKLALAQH
GLGKGHDTKS VTFKMPSSDQ LSLKRVDPSK LEAHIKRKLT KEERLEMVKA GREDRGKYQA
RTAVKQKKTG GLSNRQKQHK KKMPLAASRA KAARSRQEKK KLQKRSGKQF RGRKAWK
//
