ID A0A0D3G3L3_9ORYZ Unreviewed; 2276 AA.
AC A0A0D3G3L3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE RecName: Full=MPN domain-containing protein {ECO:0000259|PROSITE:PS50249};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART05G04400.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART05G04400.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART05G04400.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART05G04400.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR STRING; 65489.A0A0D3G3L3; -.
DR PaxDb; 65489-OBART05G04400-1; -.
DR EnsemblPlants; OBART05G04400.1; OBART05G04400.1; OBART05G04400.
DR Gramene; OBART05G04400.1; OBART05G04400.1; OBART05G04400.
DR eggNOG; KOG1795; Eukaryota.
DR HOGENOM; CLU_000380_3_0_1; -.
DR Proteomes; UP000026960; Chromosome 5.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0008237; F:metallopeptidase activity; IEA:InterPro.
DR GO; GO:0030623; F:U5 snRNA binding; IEA:InterPro.
DR GO; GO:0017070; F:U6 snRNA binding; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR CDD; cd08056; MPN_PRP8; 1.
DR CDD; cd13838; RNase_H_like_Prp8_IV; 1.
DR Gene3D; 1.20.80.40; -; 1.
DR Gene3D; 3.30.420.230; -; 1.
DR Gene3D; 3.90.1570.40; -; 1.
DR Gene3D; 3.40.140.10; Cytidine Deaminase, domain 2; 1.
DR Gene3D; 3.30.43.40; Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain; 1.
DR InterPro; IPR000555; JAMM/MPN+_dom.
DR InterPro; IPR037518; MPN.
DR InterPro; IPR012591; PRO8NT.
DR InterPro; IPR012592; PROCN.
DR InterPro; IPR012984; PROCT.
DR InterPro; IPR027652; PRP8.
DR InterPro; IPR021983; PRP8_domainIV.
DR InterPro; IPR043173; Prp8_domainIV_fingers.
DR InterPro; IPR043172; Prp8_domainIV_palm.
DR InterPro; IPR019581; Prp8_U5-snRNA-bd.
DR InterPro; IPR042516; Prp8_U5-snRNA-bd_sf.
DR InterPro; IPR019580; Prp8_U6-snRNA-bd.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR019582; RRM_spliceosomal_PrP8.
DR PANTHER; PTHR11140; PRE-MRNA SPLICING FACTOR PRP8; 1.
DR PANTHER; PTHR11140:SF0; PRE-MRNA-PROCESSING-SPLICING FACTOR 8; 1.
DR Pfam; PF01398; JAB; 1.
DR Pfam; PF08082; PRO8NT; 1.
DR Pfam; PF08083; PROCN; 1.
DR Pfam; PF08084; PROCT; 1.
DR Pfam; PF12134; PRP8_domainIV; 1.
DR Pfam; PF10598; RRM_4; 1.
DR Pfam; PF10597; U5_2-snRNA_bdg; 1.
DR Pfam; PF10596; U6-snRNA_bdg; 1.
DR SMART; SM00232; JAB_MPN; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 2.
DR PROSITE; PS50249; MPN; 1.
PE 4: Predicted;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 2044..2175
FT /note="MPN"
FT /evidence="ECO:0000259|PROSITE:PS50249"
SQ SEQUENCE 2276 AA; 266440 MW; 58C78020A2D9DECC CRC64;
MPPEHVRKII RDHGDMSSKK YRHDKRVYLG ALKFVPHAVY KLLENMPMPW EQVRHVKILY
HITGAITFVN EIPWVVEPIY LAQWGTMWIM MRREKRDRRH FKRMRFPPFD DEEPPLDYAD
NLLDVEPLEA IQLELDEEED SAVHEWFYDH KPLVKTKLIN GPSYRKWHLS LPIMATLYRL
AGQLLSDLID RNYFYLFDME SFFTAKALNM CIPGGPKFEP LYRDMEKGDE DWNEFNDINK
LIIRQPLRTE YRIAFPHLYN NRPRKVRLGV YHTPMIMYIK TEDPDLPAFY YDPLINPITS
AIKVDRRERR TIEEDDDEDF CLPDGVEPLL KGTELYTDTT AAGISLLFAP KPFNMRSGRT
RRAEDIPLVS EWYKEHCPPA YPVRVSYQKL LKCYVLNELH HRPPKAQKKK HLFRSLQATK
FFQTTELDWA EAGLQVCKQG YNMLNLLIHR KNLNYLHLDY NFNLKPVKTL TTKERKKSRF
GNAFHLCREI LRLTKLVVDA NIQFRLGNVD AFQLADGLQY IFSHVGQLTG MYRYKYRLMR
QIRMCKDLKH LIYYRFNTGP VGKGPGCGFW APMWRVWLFF LRGIVPLLER WLGNLLARQF
EGRHSKGVAK TVTKQRVESH FDLELRAAVM HDVLDAMPEG IKQNKARTIL QHLSEAWRCW
KANIPWKVPG LPVPIENMIL RYVKSKADWW TNVAHYNRER IRRGATVDKT VCRKNLGRLT
RLWLKAEQER QHNYLKDGPY VTPEEAVAIY TTTVHWLESR KFSPIPFPPL SYKHDTKLLI
LALERLKESY SVAVRLNQLQ REELGLIEQA YDNPHEALSR IKRHLLTQRA FKEVGIEFMD
LYSYLIPVYE IEPLEKITDA YLDQYLWYEG DKRHLFPNWV KPADSEPPPL LVYKWCQGIN
NLQDVWDTSD GQCVVMLQTK FEKFFEKIDL TLLNRLLRLV LDHNIADYVT AKNNVVLSYK
DMSHTNSYGL IRGLQFASFV VQYYGLVLDL LLLGLTRASE IAGPPTMPNE FLTYADTKIE
TRHPIRLYSR YVDKVHIMFR FTHEEARDLI QRYLTEHPDP NNENMVGYNN KKCWPRDARM
RLMKHDVNLG RSVFWDMKNR LPRSITTLEW ENSFVSVYSK DNPNLLFSMC GFEVRILPKI
RMTQEAFSNT KDGVWNLQNE QTKERTAIAF LRVDDEHMKV FENRVRQILM SSGSTTFTKI
VNKWNTALIG LMTYFREATV HTQELLDLLV KCENKIQTRI KIGLNSKMPS RFPPVIFYTP
KEIGGLGMLS MGHILIPQSD LRYSKQTDVG VTHFRSGMSH EEDQLIPNLY RYIQPWESEF
IDSQRVWAEY ALKRQEAQSQ NRRLTLEDLE DSWDRGIPRI NTLFQKDRHT LAYDKGWRVR
TDFKQYQVLK QNPFWWTHQR HDGKLWNLNN YRTDVIQALG GVEGILEHTL FKGTYFPTWE
GLFWEKASGF EESMKYKKLT NAQRSGLNQI PNRRFTLWWS PTINRANVYV GFQVQLDLTG
IFMHGKIPTL KISLIQIFRA HLWQKIHESV VMDLCQVLDQ ELDALEIETV QKETIHPRKS
YKMNSSCADI LLFAAHRWQM SKPSLVSESK DVFDQKASNK YWIDVQLRWG DYDSHDIERY
TRAKFMDYTT DNMSIYPSPT GVMIGIDLAY NLHSAFGNWF PGSKPLLQQA MNKIMKSNPA
LYVLRERIRK GLQLYSSEPT EPYLSSQNYG EIFSNQIIWF VDDTNVYRVT IHKTFEGNLT
TKPINGAIFI FNPRTGQLFL KVIHTSVWAG QKRLGQLAKW KTAEEVAALV RSLPVEEQPK
QIIVTRKGML DPLEVHLLDF PNIVIKGSEL QLPFQACLKI EKFGDLILKA TEPQMVLYNI
YDDWLKSISS FTAFSRIVLI LRALHVNNEK AKMLLKPDKT IVTEPHHIWP TLTDEQWLKV
ECALRDLILS DYAKKNNVNT SALTQSEIRD IILGAEIAPP SQQRQQIAEI EKQSRESTQL
TAVTTRTTNV HGDELIITTT SPYEQQAFAS KTDWRVRAIS ATNLYLRVNH IYVNSDDIKE
TGYTYIMPKN ILKKFICIAD LRTQIAGFLY GLSPQDNPQV KEIRCIAIPP QHGTHQMVTL
PANLPEHEFL NDLEPLGWMH TQPNEAPQLS PQDLTSHAKI LENNKQWDGE KCIILTCSFT
PGSCSLTAYK LTPSGYEWGR SNKDSGSNPH GYLPTHYEKV QMLLSDRFLG FYMVPDNTPW
NFNFMGVKHD PLMKYNMKLG TPRDFYHEDH RPTHFLEFSN IDEGEVAEGD REDTFT
//
