ID A0A0D3G775_9ORYZ Unreviewed; 1077 AA.
AC A0A0D3G775;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART05G15140.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART05G15140.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART05G15140.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART05G15140.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3G775; -.
DR STRING; 65489.A0A0D3G775; -.
DR PaxDb; 65489-OBART05G15140-1; -.
DR EnsemblPlants; OBART05G15140.1; OBART05G15140.1; OBART05G15140.
DR Gramene; OBART05G15140.1; OBART05G15140.1; OBART05G15140.
DR eggNOG; KOG0923; Eukaryota.
DR HOGENOM; CLU_001832_7_1_1; -.
DR Proteomes; UP000026960; Chromosome 5.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF208; RNA HELICASE; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960}.
FT DOMAIN 419..584
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 611..786
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 111..217
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1038..1077
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 128..153
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 166..217
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1051..1077
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1077 AA; 119063 MW; 14E95934015FD560 CRC64;
MAASDDGQLR TWVSDRLMAL LGYSQGLVAR LVVRLARECA SAGDLAARLV DLAGFPPSPD
TAAFAEDVYG RVPRSCGGGG DDAGVSEYQR QMQEAAAMAK KQSTIKLVDD DGEIGVSASP
SSGGRKRFRR KAVGENDDDA GRNARRRRSP DDEEEDGDAG EEEEMERDQI ERAQLERNIR
ERDAASTRRL TDRKTTKREQ GELARRSDAM DKNDTSGLRR LSRRAYLQRR KEKKVEEMRD
EIVDHEFLFP GVQLTAAEER DMRHKKQVYG LVHDRDDGAG DDYYRMPDAY DAAANVDQEK
RFSVARRRYE EPAEAARDGK TANALSEQEA WEEQQIRKSR LQFGSMDRGQ RGDEYELLFD
DGVEFVRSTV MAGTAPADDD DTAAAAAADE YHAEAMDAKA TLQDERKTLP VYKLKDDLLK
AIDEHQVLIV VGETGSGKTT QIPQYLHEVG YTAGGRKKVA CTQPRRVAAM SVAARVAEEM
GVKLGHEVGY SIRFEDCTSE KTVIKYMTDG MLLREFLGEP DLGSYSVVVV DEAHERTLAT
DILFGLVKDI ARLRPDMKLL ISSATLNADK FSDFFDAAPV FRIPGRRFEV GIHYTVAPEA
DYIDATWDTE AAAAANGKVT ELVICPIYAN LPAELQAKIF EPTPTGVLKV VLATNIADAE
TPYNPRTAME SFLVAPPAPA GARKVVLATN IAETSLTIDG IKYVVDPGFC KVKSYNPRTG
MESLVVAPVS RASAEQRAGR SGRTGPGECF RLYTEYNFVS DLDDDAVPEI QRSNLASVVL
ALKALGINDL VGFDFMDPPP AESLLRALEE LFALGALNSR GELTKTGRRM AEFPLDPMLS
KAIVASERYG CSEEVITIAA MLSTGNAVFY RPRDKRVHAD AARRAFHAGN AGDHVALLNV
YNAWAESGYS PQWCRESFVQ HRTMRRARDV RDQLGALLER VEIAPCSSAG GGDLDAVRKA
VTAGYFRHAA RLQRDGSYRA VKSRQTVFVH PSSGVAQAPP RWALYHELVL TTKEYMRQVT
ELKPEWLVEI APHYYERKDV DEPEPKKKTA AATPQEQTTA GSTPTKQTPN LNSFFDV
//
