ID A0A0D3GD29_9ORYZ Unreviewed; 493 AA.
AC A0A0D3GD29;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART06G03920.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART06G03920.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART06G03920.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART06G03920.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
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DR AlphaFoldDB; A0A0D3GD29; -.
DR STRING; 65489.A0A0D3GD29; -.
DR PaxDb; 65489-OBART06G03920-1; -.
DR EnsemblPlants; OBART06G03920.1; OBART06G03920.1; OBART06G03920.
DR Gramene; OBART06G03920.1; OBART06G03920.1; OBART06G03920.
DR eggNOG; KOG0548; Eukaryota.
DR HOGENOM; CLU_553638_0_0_1; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000026960; Chromosome 6.
DR GO; GO:0043229; C:intracellular organelle; IEA:UniProt.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR CDD; cd16655; RING-Ubox_WDSUB1-like; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR InterPro; IPR003613; Ubox_domain.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46803; E3 UBIQUITIN-PROTEIN LIGASE CHIP; 1.
DR PANTHER; PTHR46803:SF2; E3 UBIQUITIN-PROTEIN LIGASE CHIP; 1.
DR Pfam; PF04564; U-box; 1.
DR SMART; SM00028; TPR; 3.
DR SMART; SM00504; Ubox; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 1.
DR PROSITE; PS51698; U_BOX; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786}.
FT REPEAT 217..250
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 420..479
FT /note="U-box"
FT /evidence="ECO:0000259|PROSITE:PS51698"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 345..417
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 493 AA; 55629 MW; 276EA9B3BFCEB6D3 CRC64;
MNDIYSRNRT SPYESSKNQR RADGLSALAA DPARELDVLG HDGDALGVDG AQVGVLEQPD
EVRLGGLLQR GDGGALEAEV GLEVLGDLAD EALEGELADE QLRALLVLAD LTERDGAGPE
ACEECVADCD EALGRRRRRR DARCGCDEKL AADALFLKAL ALLNLAVCAA DHEPAITALE
GSLELRPGSK ETRAKLEMAK RNRDAFAEQE RLDQEAAKTH RDKGLELLRK KKYKEAEMQF
TEAIKRNPRY PKNFSDRARC LIELNSLPKV LEDANRCIEL DDTLGMGYLR KGLVQIAMAK
YEDAIATLVD GLKHDPQNLS IHNGLRECAA RIKMAKDSDA IAKDLTKHQR KIECLHKQLN
EGENKASKER SRRMKSEKLV KTLSSQVEQL RSANERNANL ERKLSECRER FEQLQSIQNR
ILQHFTCPIS HEVMNDPLMA ADGHTYEAKF IRDWFRRGHN TSPITNVELE HKKLLPNHVC
NKLHYYYYRA IFW
//