ID A0A0D3GDN1_9ORYZ Unreviewed; 301 AA.
AC A0A0D3GDN1;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:OBART06G05700.1};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART06G05700.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART06G05700.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART06G05700.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART06G05700.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3GDN1; -.
DR STRING; 65489.A0A0D3GDN1; -.
DR PaxDb; 65489-OBART06G05700-2; -.
DR EnsemblPlants; OBART06G05700.1; OBART06G05700.1; OBART06G05700.
DR EnsemblPlants; OBART06G05700.2; OBART06G05700.2; OBART06G05700.
DR Gramene; OBART06G05700.1; OBART06G05700.1; OBART06G05700.
DR Gramene; OBART06G05700.2; OBART06G05700.2; OBART06G05700.
DR eggNOG; KOG0107; Eukaryota.
DR HOGENOM; CLU_012062_20_1_1; -.
DR Proteomes; UP000026960; Chromosome 6.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd12373; RRM_SRSF3_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR23147; SERINE/ARGININE RICH SPLICING FACTOR; 1.
DR PANTHER; PTHR23147:SF102; SERINE_ARGININE-RICH SPLICING FACTOR RSZ21A; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW mRNA processing {ECO:0000256|ARBA:ARBA00023187};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 76..147
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 162..177
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 184..252
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 190..206
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 301 AA; 33502 MW; 72181F28D63D8E9D CRC64;
MSPRAQRPRP KPRAVSPHKP NPTYIISPPS LPCRLLELSI SGSRPPTTPP LSSPCAAAEF
LAAAAAAAAA AAVAMARVYV GNLDPRVTAR ELEDEFRVFG VLRSVWVARK PPGFAFIDFD
DRRDAQDAIR DIDGKNGWRV ELSRNASSGR GGRDRYGSSE SKCYECGETG HFARECRLRI
GSGGLGSGRR RSRSRSRSRS PRYRRSPSYG RRSYSPAGRS PRRRSVSPAR ARSYSRSPQY
NRGRDESPAY DNGYRRSRSI GLHCLNDSAD YGYQLYLRGC VLRSSFYARP RLLHANVIQP
H
//
