ID A0A0D3GN35_9ORYZ Unreviewed; 407 AA.
AC A0A0D3GN35;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=Ku domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART07G05480.2};
RN [1] {ECO:0000313|EnsemblPlants:OBART07G05480.2}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART07G05480.2};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART07G05480.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; A0A0D3GN35; -.
DR EnsemblPlants; OBART07G05480.2; OBART07G05480.2; OBART07G05480.
DR Gramene; OBART07G05480.2; OBART07G05480.2; OBART07G05480.
DR HOGENOM; CLU_014815_0_0_1; -.
DR Proteomes; UP000026960; Chromosome 7.
DR GO; GO:0043564; C:Ku70:Ku80 complex; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0042162; F:telomeric DNA binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006303; P:double-strand break repair via nonhomologous end joining; IEA:InterPro.
DR GO; GO:0000723; P:telomere maintenance; IEA:InterPro.
DR CDD; cd01458; vWA_ku; 1.
DR Gene3D; 2.40.290.10; -; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR InterPro; IPR006165; Ku70.
DR InterPro; IPR006164; Ku70/Ku80_beta-barrel_dom.
DR InterPro; IPR005161; Ku_N.
DR InterPro; IPR016194; SPOC-like_C_dom_sf.
DR InterPro; IPR036465; vWFA_dom_sf.
DR NCBIfam; TIGR00578; ku70; 1.
DR PANTHER; PTHR12604; KU AUTOANTIGEN DNA HELICASE; 1.
DR PANTHER; PTHR12604:SF2; X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 6; 1.
DR Pfam; PF02735; Ku; 1.
DR Pfam; PF03731; Ku_N; 1.
DR SUPFAM; SSF100939; SPOC domain-like; 1.
DR SUPFAM; SSF53300; vWA-like; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960}.
FT DOMAIN 30..263
FT /note="Ku70/Ku80 N-terminal alpha/beta"
FT /evidence="ECO:0000259|Pfam:PF03731"
FT DOMAIN 272..383
FT /note="Ku"
FT /evidence="ECO:0000259|Pfam:PF02735"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 407 AA; 46087 MW; 6F4AF35955B7AB9A CRC64;
MDLDPEGLFR DDSDEDDDNV QEREANKEMV VYLIDASPKM FTPATKADEK EETHFHTIVN
CITHALKTQI IGRSYDEVAI CFFNTKEKKN LQELAGVYVY NVTEREPLDR PDARLIKEFS
CIEDSFMSNI GSRYGITSGS RENTLYNALW VAQALLRKGS VKTVSKRIVI FTNEDDPFGG
LTGAVKTDMI RTTIQRARDA QDLGLSIELL PLSRPDEEFN MSLFYADLIG LEGDEIVDYL
PSSGEKLEDM TNQLKKRMMK KRKVKTLAFA ITNDVCIEVN TYALIRPTTP GAITWLDSIS
NLPLKAERSF ICNDTGALLQ DPQKRFQVYN DKIVKFSTRE LSDVKRVSSH HLRLLGFKPL
DYLKDYHNLR PSTFIYPSDE ASTDLDSPGT TLLARTSSDL VAEKTTS
//
