ID A0A0D3GPD4_9ORYZ Unreviewed; 742 AA.
AC A0A0D3GPD4;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=Phospholipase D {ECO:0000256|ARBA:ARBA00012027, ECO:0000256|PIRNR:PIRNR036470};
DE EC=3.1.4.4 {ECO:0000256|ARBA:ARBA00012027, ECO:0000256|PIRNR:PIRNR036470};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART07G09490.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART07G09490.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART07G09490.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART07G09490.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- FUNCTION: Hydrolyzes glycerol-phospholipids at the terminal
CC phosphodiesteric bond. {ECO:0000256|PIRNR:PIRNR036470}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = a 1,2-diacyl-
CC sn-glycero-3-phosphate + choline + H(+); Xref=Rhea:RHEA:14445,
CC ChEBI:CHEBI:15354, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:57643, ChEBI:CHEBI:58608; EC=3.1.4.4;
CC Evidence={ECO:0000256|ARBA:ARBA00000798,
CC ECO:0000256|PIRNR:PIRNR036470};
CC -!- COFACTOR:
CC Name=Ca(2+); Xref=ChEBI:CHEBI:29108;
CC Evidence={ECO:0000256|ARBA:ARBA00001913,
CC ECO:0000256|PIRNR:PIRNR036470};
CC -!- SIMILARITY: Belongs to the phospholipase D family. C2-PLD subfamily.
CC {ECO:0000256|ARBA:ARBA00010683, ECO:0000256|PIRNR:PIRNR036470}.
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DR AlphaFoldDB; A0A0D3GPD4; -.
DR STRING; 65489.A0A0D3GPD4; -.
DR PaxDb; 65489-OBART07G09490-1; -.
DR EnsemblPlants; OBART07G09490.1; OBART07G09490.1; OBART07G09490.
DR Gramene; OBART07G09490.1; OBART07G09490.1; OBART07G09490.
DR eggNOG; KOG1329; Eukaryota.
DR HOGENOM; CLU_004684_0_0_1; -.
DR Proteomes; UP000026960; Chromosome 7.
DR GO; GO:0016020; C:membrane; IEA:InterPro.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0070290; F:N-acylphosphatidylethanolamine-specific phospholipase D activity; IEA:UniProtKB-EC.
DR GO; GO:0004630; F:phospholipase D activity; IEA:UniProtKB-EC.
DR GO; GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
DR GO; GO:0046470; P:phosphatidylcholine metabolic process; IEA:InterPro.
DR CDD; cd04015; C2_plant_PLD; 1.
DR Gene3D; 2.60.40.150; C2 domain; 1.
DR Gene3D; 3.30.870.10; Endonuclease Chain A; 2.
DR InterPro; IPR000008; C2_dom.
DR InterPro; IPR035892; C2_domain_sf.
DR InterPro; IPR001736; PLipase_D/transphosphatidylase.
DR InterPro; IPR024632; PLipase_D_C.
DR InterPro; IPR015679; PLipase_D_fam.
DR InterPro; IPR011402; PLipase_D_pln.
DR PANTHER; PTHR18896; PHOSPHOLIPASE D; 1.
DR PANTHER; PTHR18896:SF153; PHOSPHOLIPASE D; 1.
DR Pfam; PF00168; C2; 1.
DR Pfam; PF12357; PLD_C; 1.
DR PIRSF; PIRSF036470; PLD_plant; 2.
DR SMART; SM00239; C2; 1.
DR SUPFAM; SSF49562; C2 domain (Calcium/lipid-binding domain, CaLB); 1.
DR SUPFAM; SSF56024; Phospholipase D/nuclease; 2.
DR PROSITE; PS50004; C2; 1.
DR PROSITE; PS50035; PLD; 1.
PE 3: Inferred from homology;
KW Calcium {ECO:0000256|PIRNR:PIRNR036470};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|PIRNR:PIRNR036470};
KW Lipid degradation {ECO:0000256|ARBA:ARBA00022963,
KW ECO:0000256|PIRNR:PIRNR036470};
KW Lipid metabolism {ECO:0000256|ARBA:ARBA00022963,
KW ECO:0000256|PIRNR:PIRNR036470};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960}.
FT DOMAIN 1..114
FT /note="C2"
FT /evidence="ECO:0000259|PROSITE:PS50004"
FT DOMAIN 320..355
FT /note="PLD phosphodiesterase"
FT /evidence="ECO:0000259|PROSITE:PS50035"
SQ SEQUENCE 742 AA; 84202 MW; 2F12ACD3B022A185 CRC64;
MDLMTERMRK CFTGYGACST ECGKSDPHTD VRKIITSDPY VSVCLSGATV AQTRVIANSE
NPKWDEHFYV QVAHSVSRVE FHVKDNDVFG AELIGVASVP VENITPGDTV SGWFPISGQY
SNPMKASPEL HLSIQYKPIE QNPLYKDGVG SDGCQSIGVP NAYFPLRKGG MVTLYQDAHI
PDDFCPKIEI DGGRVYEQNK CWEDICHAIA EAHHLIYIIG WSLYHPVKLV RESTKPVPNG
SPPTLGGLLK SKVQEGVRVI VLLWDDKTSH DKFLLKTDGL MHTHDEEARK FFRHSGVHCV
LAPRYASNKL SIFKQQVVGT LFTHHQKCVI VDTQVIGNNR KITAFIGGLD LCDGRYDTPE
HRLFKDLDTV FKDDFHNPTF QVNKSGPRQP WHDLHCKIEG PAAYDILTNF EQRWRKSAKW
KVSVRRAVSW HHDTLVKINR MSWIVSPSAD ELNARVCEQD DPENWHVQIF RSIDSGSVKG
FPKLVQEAES QNLVCAKNLQ IDKSIHNAYV KAIRSAQHYI YIENQYFIGS SYYWSSNRSA
GAENLIPIEL AIKIARKIKA RERFAAYIVI PMWPEGNPTT AAMQEILFWQ GQTMSMMYKI
VAEALQKEGL HDTHPQDYLN FYCLGKREVS NDVSTTSQSN ENSPQVYGYR MSLWAEHLGT
VEECFRWPHS VECVRQVNEM AEENWARYVS PEMVNMRGHL MRYPINVERD GRVGPVHGYE
CFPDVGGKVL GTHSSLPNAL TT
//
