ID A0A0D3HGY8_9ORYZ Unreviewed; 867 AA.
AC A0A0D3HGY8;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART10G19610.2};
RN [1] {ECO:0000313|EnsemblPlants:OBART10G19610.2}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART10G19610.2};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART10G19610.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3HGY8; -.
DR EnsemblPlants; OBART10G19610.2; OBART10G19610.2; OBART10G19610.
DR Gramene; OBART10G19610.2; OBART10G19610.2; OBART10G19610.
DR HOGENOM; CLU_016978_0_0_1; -.
DR Proteomes; UP000026960; Chromosome 10.
DR GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR004198; Znf_C5HC2.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF107; LYSINE-SPECIFIC DEMETHYLASE JMJ706; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR Pfam; PF02928; zf-C5HC2; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 119..160
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 266..436
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 749..800
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 838..859
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 838..856
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 867 AA; 97200 MW; 660F4A50812D3F6F CRC64;
MWHPYLPPLP WRAETPMQQV EGRNCLPAEV RIGLETLKRR RLERMRLTAQ NNAGDGPPVP
ARSGGDALRT PANCGVRLHA NNGTALPSGT TQNKDPFAKC RVDKFDMSSL EWIDKIEECP
VYYPTKEEFE DPIGYIQKIA PVASKYGICK IVSPVSASVP AGVVLMKEQP GFKFMTRVQP
LRLAKWAEDD TVTFFMSERK YTFRDYEKMA NKVFAKKYSS ASCLPAKYVE EEFWREIAFG
KMDFVEYACD VDGSAFSSSP HDQLGKSNWN LKNFSRLSNS VLRLLQTPIP GVTDPMLYIG
MLFSMFAWHV EDHYLYSINY HHCGAFKTWY GIPGDAAPGF EKVASQFVYN KDILVGEGED
AAFDVLLGKT TMFPPNVLLD HNIPVYKAVQ KPGEFVITFP RSYHAGFSHG FNCGEAVNFA
ISDWFPLGSV ASRRYALLNR TPLLAHEELL CRSAVLLSHK LLNSDPKSLN KSEHPHSQCC
LKSCFVQLMR FQRNTRGLLA KMGSQIHYKP KTYPNLSCSM CRRDCYITHV LCGCNFDPVC
LHHEQELRSC PCKSNRVVYV REDIQELEAL SRKFEKDICL DKEISGFDSY KQAEKNEPFF
EITRNLRNTE ANLIEDAFSG ATAADAAKSS PATSTLTSFA QHDVPVLAEA IVCANQADQL
YSTTKQTISS PLVKGTDAVG ANSSSMADAN NGTGSCNASA VEYSGNSDSE SEIFRVKRRS
GVSVKPASDA KTSNLRLKKV CPEIQQHNKR PEDYGHCSVP SGRMSMKNLN SSSSCGEEHW
RMKRRQLETQ QDESSYSAKQ KSYSYPSTSY SFRGEFVEMS RDAAAEVRPK RLKIRLPSSS
TNRVVEQGSS GQRFTRDDKS LGCWPAI
//
