ID A0A0D5YR16_9FLAO Unreviewed; 459 AA.
AC A0A0D5YR16;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=Excinuclease cho {ECO:0000256|ARBA:ARBA00040756};
DE AltName: Full=Endonuclease cho {ECO:0000256|ARBA:ARBA00042732};
DE AltName: Full=UvrC homolog protein {ECO:0000256|ARBA:ARBA00042138};
GN ORFNames=VC82_699 {ECO:0000313|EMBL:AKA34364.1};
OS Allomuricauda lutaonensis.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Allomuricauda.
OX NCBI_TaxID=516051 {ECO:0000313|EMBL:AKA34364.1, ECO:0000313|Proteomes:UP000032726};
RN [1] {ECO:0000313|EMBL:AKA34364.1, ECO:0000313|Proteomes:UP000032726}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CC-HSB-11 {ECO:0000313|EMBL:AKA34364.1,
RC ECO:0000313|Proteomes:UP000032726};
RA Kim K.M.;
RT "Complete genome sequence of Muricauda lutaonensis CC-HSB-11T, isolated
RT from a coastal hot spring.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP011071; AKA34364.1; -; Genomic_DNA.
DR RefSeq; WP_045801133.1; NZ_CP011071.1.
DR AlphaFoldDB; A0A0D5YR16; -.
DR STRING; 516051.VC82_699; -.
DR KEGG; mlt:VC82_699; -.
DR PATRIC; fig|516051.4.peg.728; -.
DR HOGENOM; CLU_030720_1_0_10; -.
DR OrthoDB; 9803913at2; -.
DR Proteomes; UP000032726; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProt.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR CDD; cd10434; GIY-YIG_UvrC_Cho; 1.
DR Gene3D; 3.40.1440.10; GIY-YIG endonuclease; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR047296; GIY-YIG_UvrC_Cho.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30562:SF10; EXCINUCLEASE CHO; 1.
DR PANTHER; PTHR30562; UVRC/OXIDOREDUCTASE; 1.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF82771; GIY-YIG endonuclease; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
PE 4: Predicted;
KW DNA-directed DNA polymerase {ECO:0000313|EMBL:AKA34364.1};
KW Nucleotidyltransferase {ECO:0000313|EMBL:AKA34364.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000032726};
KW Transferase {ECO:0000313|EMBL:AKA34364.1}.
FT DOMAIN 197..273
FT /note="GIY-YIG"
FT /evidence="ECO:0000259|PROSITE:PS50164"
SQ SEQUENCE 459 AA; 51862 MW; A0590FF4B3FC2525 CRC64;
MYTIIDIETT GNGIKGNKIT EIAIFKFDGT KVVDEFTSLV NPECEIPYFI TGLTGIDDNM
VRNAPLFKDI AHKILEMTKD CVFVAHSVNF DYGVIKEEFR QIGVDFIRKK LCTVRLARKL
VPGLNSYSLG KLCSSLRIPI TDRHRARGDA KATVVLFRLL LQKPMAQQLV GSFLNARSQE
ATLPPLVSKE MVDHLPQKPG IYYFKNNAGN IIYVGKAINI KKRVLGHFYD KSNKESRMCR
EIASIDYELS GNELLALLME SAAIKRHFPP YNRAQKRFAK AYAIFSYEDR NGLQHLAYNT
LKNVHEPIQV FYNPTDCRTF LKQLCDTFSL CPKYCHLQNG NGLCTHCADS CEKTASIDTY
NQKVDKAILS SRQGKISYLI KEKGRTPQED ALIAVKDGIY QGYAFIDREM PINSLEDLEA
HIIKQKNTLE TESIIGGYLI RKGPSKVQPV PKMPLANPS
//
