ID A0A0D6TPX4_9FLAO Unreviewed; 453 AA.
AC A0A0D6TPX4;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Exonuclease {ECO:0000313|EMBL:KIX22314.1};
GN ORFNames=SY27_00150 {ECO:0000313|EMBL:KIX22314.1};
OS Flavobacterium sp. 316.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=1603293 {ECO:0000313|EMBL:KIX22314.1, ECO:0000313|Proteomes:UP000032747};
RN [1] {ECO:0000313|EMBL:KIX22314.1, ECO:0000313|Proteomes:UP000032747}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=316 {ECO:0000313|EMBL:KIX22314.1,
RC ECO:0000313|Proteomes:UP000032747};
RA Karczewska-Golec J., Kochanowska-Lyzen M., Balut M., Golec P.,
RA Madanecki P., Markert S., Piotrowski A., Schweder T., Szalewska-Palasz A.;
RT "Three Bacterial Inhabitants of the Baltic Sea under Osmotic Stress: a
RT Genomic and a Proteomic Perspective.";
RL Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KIX22314.1}.
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DR EMBL; JYGZ01000001; KIX22314.1; -; Genomic_DNA.
DR RefSeq; WP_045966318.1; NZ_JYGZ01000001.1.
DR AlphaFoldDB; A0A0D6TPX4; -.
DR STRING; 1603293.SY27_00150; -.
DR PATRIC; fig|1603293.4.peg.31; -.
DR OrthoDB; 9803913at2; -.
DR Proteomes; UP000032747; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR CDD; cd10434; GIY-YIG_UvrC_Cho; 1.
DR Gene3D; 3.40.1440.10; GIY-YIG endonuclease; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR047296; GIY-YIG_UvrC_Cho.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF82771; GIY-YIG endonuclease; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000313|EMBL:KIX22314.1};
KW Hydrolase {ECO:0000313|EMBL:KIX22314.1};
KW Nuclease {ECO:0000313|EMBL:KIX22314.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000032747}.
FT DOMAIN 195..271
FT /note="GIY-YIG"
FT /evidence="ECO:0000259|PROSITE:PS50164"
SQ SEQUENCE 453 AA; 52217 MW; A2D5E72BB6FE3604 CRC64;
MYAILDIETT GGQYNEEGIT EIAIYKFDGH EIVDQFISLV NPEKPIQPFV VKLTGINNAM
LRSAPKFYEV AKRIIEITEG CVLVAHNAAF DYRILSTEFR RLGYTYKKST LCTIELAKKL
IPEQPSYSLG KLVRSLGIPI ADRHRANGDA MATMKLFRLL LSKDSEKEIV KSYVKTEVKA
GILPKLLDIV ESLPSKIGIY YIHNEKGDVI YIGKSKNIKK RVNQHFTGTS PKSKKIQREV
FTVTFEETGN ELVALLKESE EIKINKPIYN RAQRKTLFQW ALYAEKDSKG YIILKISKFD
GRKKEITSFT SLQEGRKTLF KITEEYNLCQ KLNGLYDTKK GCFQYDVKTC FGACIEKEKP
EDYNKRVNEF IDQNTFLNNN MIIIDKGRSH DERSAILIEN GVYKGYCFYG LNYQINNIEI
LKKLIIPMQN NRDTKNIIQG YLRKRKVMKV VTF
//
