GenomeNet

Database: UniProt
Entry: A0A0D7E1V2_RHOPL
LinkDB: A0A0D7E1V2_RHOPL
Original site: A0A0D7E1V2_RHOPL 
ID   A0A0D7E1V2_RHOPL        Unreviewed;       565 AA.
AC   A0A0D7E1V2;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   16-JAN-2019, entry version 13.
DE   RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN   ORFNames=OO17_26765 {ECO:0000313|EMBL:KIZ34491.1};
OS   Rhodopseudomonas palustris.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Rhodopseudomonas.
OX   NCBI_TaxID=1076 {ECO:0000313|EMBL:KIZ34491.1, ECO:0000313|Proteomes:UP000032515};
RN   [1] {ECO:0000313|EMBL:KIZ34491.1, ECO:0000313|Proteomes:UP000032515}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BAL398 {ECO:0000313|EMBL:KIZ34491.1,
RC   ECO:0000313|Proteomes:UP000032515};
RA   Bentzon-Tilia M., Severin I., Hansen L.H., Riemann L.;
RT   "Genomics and ecophysiology of heterotrophic nitrogen fixing bacteria
RT   isolated from estuarine surface water.";
RL   Submitted (NOV-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Binds mRNA; thus facilitating recognition of the
CC       initiation point. It is needed to translate mRNA with a short
CC       Shine-Dalgarno (SD) purine-rich sequence.
CC       {ECO:0000256|PIRNR:PIRNR002111}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC       {ECO:0000256|PIRNR:PIRNR002111}.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:KIZ34491.1}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; JXXE01000672; KIZ34491.1; -; Genomic_DNA.
DR   RefSeq; WP_044417692.1; NZ_JXXE01000672.1.
DR   EnsemblBacteria; KIZ34491; KIZ34491; OO17_26765.
DR   PATRIC; fig|1076.23.peg.1906; -.
DR   OrthoDB; 1235756at2; -.
DR   Proteomes; UP000032515; Unassembled WGS sequence.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR000110; Ribosomal_S1.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   Pfam; PF00575; S1; 6.
DR   PIRSF; PIRSF002111; RpsA; 1.
DR   SMART; SM00316; S1; 6.
DR   SUPFAM; SSF50249; SSF50249; 6.
DR   TIGRFAMs; TIGR00717; rpsA; 1.
DR   PROSITE; PS50126; S1; 6.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000032515};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032515};
KW   Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW   Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW   ECO:0000313|EMBL:KIZ34491.1};
KW   RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT   DOMAIN       30     96       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      114    180       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      201    269       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      286    356       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      373    443       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      454    529       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   COILED       81    101       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   565 AA;  62643 MW;  E661B4BD433CC45E CRC64;
     MASTASYNPS RDDFAAMLDE SFAGGNLQES SVIKGIVVAI EKDMAVIDVG LKTEGRVALR
     EFAAPGKDSE LKVGDEVEVF LDRIENALGE AVLSRDKARR EESWGKLEKA FNNNEKVHGV
     IFNQVKGGFT VDLDGAVAFL PRSQVDIRPI RDVAPLMNNS QPFQILKMDR RRGNIVVSRR
     TVLEETRAEQ RQELVQNLEE GQVIDGVVKN ITDYGAFVDL GGIDGLLHVT DIAWRRVNHP
     TEVLTIGQTV KVKIIKINHE THRISLGMKQ LLDDPWQGIE AKYPLNARFT GRVTNITDYG
     AFVELEPGIE GLIHVSEMSW TKKNMHPGKI VSTSQEVEVQ VLEVDSVKRR ISLGLKQTMR
     NPWEVFVEKY PVGATVEGEV KNKTEFGLFL GLDGEVDGMV HLSDLDWKQP GEQVIDNFKK
     GDMVKAIVLD VDVEKERISL GVKQLEGDPF AEPGDVKKGA IVTCEVLDVK EGGIDVQIIG
     TDFATFIKRS ELARERSDQR AERFAVGEKV DARVIQFDKK ARKVQVSIKA LEVAEEKEAI
     AQYGSSDSGA TLGDILGTAL KQRDK
//
DBGET integrated database retrieval system