ID A0A0D7F4S5_RHOPL Unreviewed; 670 AA.
AC A0A0D7F4S5;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE SubName: Full=Glycogen debranching protein {ECO:0000313|EMBL:KIZ48103.1};
GN ORFNames=OO17_00670 {ECO:0000313|EMBL:KIZ48103.1};
OS Rhodopseudomonas palustris.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Rhodopseudomonas.
OX NCBI_TaxID=1076 {ECO:0000313|EMBL:KIZ48103.1, ECO:0000313|Proteomes:UP000032515};
RN [1] {ECO:0000313|EMBL:KIZ48103.1, ECO:0000313|Proteomes:UP000032515}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BAL398 {ECO:0000313|EMBL:KIZ48103.1,
RC ECO:0000313|Proteomes:UP000032515};
RA Bentzon-Tilia M., Severin I., Hansen L.H., Riemann L.;
RT "Genomics and ecophysiology of heterotrophic nitrogen fixing bacteria
RT isolated from estuarine surface water.";
RL Submitted (NOV-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC {ECO:0000256|ARBA:ARBA00008061}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KIZ48103.1}.
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DR EMBL; JXXE01000016; KIZ48103.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D7F4S5; -.
DR PATRIC; fig|1076.23.peg.770; -.
DR Proteomes; UP000032515; Unassembled WGS sequence.
DR GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR011837; Glycogen_debranch_GlgX.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR NCBIfam; TIGR02100; glgX_debranch; 1.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF3; ISOAMYLASE 3, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 2.
DR Pfam; PF02922; CBM_48; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 3: Inferred from homology;
FT DOMAIN 140..551
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 449..476
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 449..464
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 670 AA; 74251 MW; 7C25A98021CC728C CRC64;
MGRGEPLPLG LHDCCDGLNI AVFSRHAAGV TLLLYGTADE REPCARLPLD ARRHRTGDIW
HARLTGDLRG KFYALQADGP GSPDDGHDFD LDRTLLDPYA ASVTDLSPGS PGRCVVADKG
FDWFEDAPLR HPWSKTILYE THVRGLTIDP SSGVNRQGEY LGVVEKIPYF RELGITALEL
MPIQAFAPEA LERNGPLTGE RLRDYWGYNP VALFAPMSRY SGSVAPGGEL VAFKTMVREL
HRAGIEVILD VVFNHTAEGG RNGPTYSFRG LDNTIYYILT QDGEYADYTG CGNTLNCNHP
VVRNMVVDCL RHWVVHFHID GFRFDLASVL GRDARGKLLA NPPLLEQIAE DPILRDVKLI
AEAWDAGGAF QVGHFPGRRW AEWNCHFRDD VRRFWRGDPG MTGALATRLA GSSDLYQDGG
EGPLNSVNFV TSHDGFTLND LVSYTRKHNE ANGEENRDGL DENYSDNYGA EGSSDDPQIE
AMRLRQIKNL LTTLLLSRGV PMLLGGDEFR RTQGGNNNAY CQDNTVSWYD WSLAGRNAEL
VRFVRQLIAL RKAHPVLRAE TFYTDVEVRW FEPTGQQPDW HGPDNRLGCL IRDSGASLCL
LFNAALAPCR FVMPPSAGSG WHIAIDTSKN ESIADTSFGA EDTIAQSNIW LEARTTIVAV
SRSTEAGPIE
//