ID A0A0D7FH80_9PSED Unreviewed; 211 AA.
AC A0A0D7FH80;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=Large ribosomal subunit protein uL3 {ECO:0000256|HAMAP-Rule:MF_01325};
GN Name=rplC {ECO:0000256|HAMAP-Rule:MF_01325,
GN ECO:0000313|EMBL:NMZ65314.1};
GN ORFNames=A4V15_21675 {ECO:0000313|EMBL:OAN27778.1}, APT59_20070
GN {ECO:0000313|EMBL:ALZ86391.1}, CE139_24650
GN {ECO:0000313|EMBL:AXA68856.1}, HBN99_13410
GN {ECO:0000313|EMBL:NMZ65314.1};
OS Pseudomonas oryzihabitans.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=47885 {ECO:0000313|EMBL:OAN27778.1, ECO:0000313|Proteomes:UP000078356};
RN [1] {ECO:0000313|EMBL:ALZ86391.1, ECO:0000313|Proteomes:UP000064137}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=USDA-ARS-USMARC-56511 {ECO:0000313|EMBL:ALZ86391.1,
RC ECO:0000313|Proteomes:UP000064137};
RA Harhay G.P., Harhay D.M., Smith T.P.L., Bono J.L., Heaton M.P.,
RA Clawson M.L., Chitko-Mckown C.G., Capik S.F., DeDonder K.D., Apley M.D.,
RA Lubbers B.V., White B.J., Larson R.L.;
RT "Annotation of Pseudomonas oryzihabitans USDA-ARS-USMARC-56511.";
RL Submitted (JAN-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:OAN27778.1, ECO:0000313|Proteomes:UP000078356}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=H72 {ECO:0000313|EMBL:OAN27778.1,
RC ECO:0000313|Proteomes:UP000078356};
RA Lymperopoulou D., Adams R.I., Lindow S., Coil D.A., Jospin G., Eisen J.A.;
RT "Draft Genome Sequences of Staphylococcus capitis Strain H36, S. capitis
RT Strain H65, S. cohnii Strain H62, S. hominis Strain H69, Mycobacterium
RT iranicum Strain H39, Plantibacter sp. Strain H53, Pseudomonas oryzihabitans
RT Strain H72, and Microbacterium sp. Strain H83, isolated from residential
RT settings.";
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AXA68856.1, ECO:0000313|Proteomes:UP000250579}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MS8 {ECO:0000313|EMBL:AXA68856.1,
RC ECO:0000313|Proteomes:UP000250579};
RA Nascimento F.X.;
RT "Evolution towards high GC content and high-temperature stress adaptation
RT in endophytic Pseudomonas oryzihabitans impacted its plant-growth promoting
RT traits.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:NMZ65314.1, ECO:0000313|Proteomes:UP000519480}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WS 5017 {ECO:0000313|EMBL:NMZ65314.1,
RC ECO:0000313|Proteomes:UP000519480};
RX PubMed=32587583;
RA Maier C., Huptas C., von Neubeck M., Scherer S., Wenning M., Lucking G.;
RT "Genetic Organization of the aprX-lipA2 Operon Affects the Proteolytic
RT Potential of Pseudomonas Species in Milk.";
RL Front. Microbiol. 11:1190-1190(2020).
RN [5] {ECO:0000313|EMBL:NMZ65314.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=WS 5017 {ECO:0000313|EMBL:NMZ65314.1};
RA Maier C., Huptas C., von Neubeck M., Scherer S., Wenning M., Lucking G.;
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S
CC subunit. {ECO:0000256|HAMAP-Rule:MF_01325,
CC ECO:0000256|RuleBase:RU003906}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. Forms a cluster with
CC proteins L14 and L19. {ECO:0000256|HAMAP-Rule:MF_01325,
CC ECO:0000256|RuleBase:RU003906}.
CC -!- PTM: Methylated by PrmB. {ECO:0000256|HAMAP-Rule:MF_01325}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL3 family.
CC {ECO:0000256|ARBA:ARBA00006540, ECO:0000256|HAMAP-Rule:MF_01325,
CC ECO:0000256|RuleBase:RU003905}.
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DR EMBL; CP013987; ALZ86391.1; -; Genomic_DNA.
DR EMBL; CP022198; AXA68856.1; -; Genomic_DNA.
DR EMBL; JAAQXR010000003; NMZ65314.1; -; Genomic_DNA.
DR EMBL; LWCR01000027; OAN27778.1; -; Genomic_DNA.
DR RefSeq; WP_007161251.1; NZ_WVTP01000001.1.
DR STRING; 47885.APT59_20070; -.
DR GeneID; 66924077; -.
DR KEGG; por:APT59_20070; -.
DR PATRIC; fig|47885.6.peg.1841; -.
DR OrthoDB; 9806135at2; -.
DR Proteomes; UP000064137; Chromosome.
DR Proteomes; UP000078356; Unassembled WGS sequence.
DR Proteomes; UP000250579; Chromosome.
DR Proteomes; UP000519480; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.160.810; -; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR HAMAP; MF_01325_B; Ribosomal_L3_B; 1.
DR InterPro; IPR000597; Ribosomal_uL3.
DR InterPro; IPR019927; Ribosomal_uL3_bac/org-type.
DR InterPro; IPR019926; Ribosomal_uL3_CS.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR NCBIfam; TIGR03625; L3_bact; 1.
DR PANTHER; PTHR11229:SF8; 39S RIBOSOMAL PROTEIN L3, MITOCHONDRIAL; 1.
DR PANTHER; PTHR11229; 50S RIBOSOMAL PROTEIN L3; 1.
DR Pfam; PF00297; Ribosomal_L3; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR PROSITE; PS00474; RIBOSOMAL_L3; 1.
PE 3: Inferred from homology;
KW Methylation {ECO:0000256|ARBA:ARBA00022481, ECO:0000256|HAMAP-
KW Rule:MF_01325}; Reference proteome {ECO:0000313|Proteomes:UP000064137};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01325};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01325};
KW RNA-binding {ECO:0000256|HAMAP-Rule:MF_01325,
KW ECO:0000256|RuleBase:RU003906};
KW rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01325,
KW ECO:0000256|RuleBase:RU003906}.
FT MOD_RES 150
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01325"
SQ SEQUENCE 211 AA; 22535 MW; 3C77C08616CB1C11 CRC64;
MTIGLVGRKC GMTRVFTEEG VSVPVTVIEI EPNRVTQFKS EETDGYRAIQ VTVGERRASR
VTKAQAGHFA KASVAAGRSV LEFRLEDGEY KAGDEVTVAL FEAGQMVDVT GQSKGKGYAG
TIKRWNFRGQ DNTHGNSVSH RAPGSIGQCQ TPGRVFKGKK MSGHLGAERV TVQSLEVVRV
DAERNLLLVK GAVPGAPGGD VIVRPAVKAR G
//
