ID   A0A0D7NWF9_9BRAD        Unreviewed;       298 AA.
AC   A0A0D7NWF9;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   27-MAR-2024, entry version 37.
DE   SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:KJC42443.1};
GN   ORFNames=UP09_19735 {ECO:0000313|EMBL:KJC42443.1};
OS   Bradyrhizobium sp. LTSP885.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Nitrobacteraceae; Bradyrhizobium.
OX   NCBI_TaxID=1619232 {ECO:0000313|EMBL:KJC42443.1, ECO:0000313|Proteomes:UP000032343};
RN   [1] {ECO:0000313|Proteomes:UP000032343}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LTSP885 {ECO:0000313|Proteomes:UP000032343};
RX   PubMed=25909973; DOI=10.1038/ismej.2015.54;
RA   VanInsberghe D.S., Maas K.R., Cardenas E., Strachan C.R., Hallam S.J.,
RA   Mohn W.;
RT   "Non-symbiotic Bradyrhizobium ecotypes dominate North American forest
RT   soils.";
RL   ISME J. 9:2435-2441(2015).
CC   -!- FUNCTION: NodD regulates the expression of the nodABCFE genes which
CC       encode other nodulation proteins. NodD is also a negative regulator of
CC       its own expression. Binds flavonoids as inducers.
CC       {ECO:0000256|ARBA:ARBA00003502}.
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|ARBA:ARBA00009437}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KJC42443.1}.
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DR   EMBL; JYMT01000031; KJC42443.1; -; Genomic_DNA.
DR   RefSeq; WP_044539920.1; NZ_JYMT01000031.1.
DR   AlphaFoldDB; A0A0D7NWF9; -.
DR   STRING; 1619232.UP09_19735; -.
DR   PATRIC; fig|1619232.5.peg.3306; -.
DR   OrthoDB; 9775392at2; -.
DR   Proteomes; UP000032343; Unassembled WGS sequence.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd05466; PBP2_LTTR_substrate; 1.
DR   Gene3D; 3.40.190.290; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30419; HTH-TYPE TRANSCRIPTIONAL REGULATOR YBHD; 1.
DR   PANTHER; PTHR30419:SF31; LYSR FAMILY TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
KW   Activator {ECO:0000256|ARBA:ARBA00023159};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032343}.
FT   DOMAIN          1..57
FT                   /note="HTH lysR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50931"
SQ   SEQUENCE   298 AA;  32795 MW;  4AFBFCE07C562BD7 CRC64;
     MIDKLELLLA LAKERHFGRA AEACGVTQPT MSTSLKQLEE ILGVMLVQRG SRFQGFTPEG
     ERTLDWARRI VGDTRAMKQE INSLKDKLSG EIRIAAIPTV LGMVASLTTP FRAKHPDVRF
     QIQSCTSADV LGLLENLEVD AGLTYIENEP IGKVRTIPLY NESYRLLTAP DSMFGDRKQV
     TWREVGQVPL CLLTPDMQNR RIIDRALTSV GAEAKPTLTS NSLLVLYTHV KTGRWASVMP
     AKLAETLGLA DAVRSIPIVD PVVNYSIGLV IPQRDPMTPL IAALVQVARE VAPTLEAQ
//