ID A0A0D8HTN2_RHOSX Unreviewed; 327 AA.
AC A0A0D8HTN2;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE SubName: Full=Deoxyribonucleoside regulator {ECO:0000313|EMBL:KJF21204.1};
GN Name=deoR_2 {ECO:0000313|EMBL:KJF21204.1};
GN ORFNames=SZ00_04410 {ECO:0000313|EMBL:KJF21204.1};
OS Rhodococcus sp. (strain AD45).
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae;
OC Rhodococcus.
OX NCBI_TaxID=103808 {ECO:0000313|EMBL:KJF21204.1, ECO:0000313|Proteomes:UP000032323};
RN [1] {ECO:0000313|EMBL:KJF21204.1, ECO:0000313|Proteomes:UP000032323}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AD45 {ECO:0000313|EMBL:KJF21204.1,
RC ECO:0000313|Proteomes:UP000032323};
RX PubMed=25727256; DOI=10.1111/1462-2920.12793;
RA Crombie A.T., El Khawand M., Rhodius V.A., Fengler K.A., Miller M.C.,
RA Whited G.M., McGenity T.J., Murrell J.C.;
RT "Regulation of plasmid-encoded isoprene metabolism in Rhodococcus, a
RT representative of an important link in the global isoprene cycle.";
RL Environ. Microbiol. 17:3314-3329(2015).
CC -!- SIMILARITY: Belongs to the SorC transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00010466}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJF21204.1}.
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DR EMBL; JYOP01000003; KJF21204.1; -; Genomic_DNA.
DR RefSeq; WP_045069050.1; NZ_JYOP01000003.1.
DR AlphaFoldDB; A0A0D8HTN2; -.
DR PATRIC; fig|103808.5.peg.4924; -.
DR OrthoDB; 186585at2; -.
DR Proteomes; UP000032323; Unassembled WGS sequence.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 3.40.50.1360; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR037171; NagB/RpiA_transferase-like.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR007324; Sugar-bd_dom_put.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR34294; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR PANTHER; PTHR34294:SF1; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR Pfam; PF04198; Sugar-bind; 1.
DR SUPFAM; SSF100950; NagB/RpiA/CoA transferase-like; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000032323}.
FT DOMAIN 26..57
FT /note="RNA polymerase sigma-70 region 4"
FT /evidence="ECO:0000259|Pfam:PF04545"
FT DOMAIN 74..326
FT /note="Sugar-binding"
FT /evidence="ECO:0000259|Pfam:PF04198"
SQ SEQUENCE 327 AA; 35788 MW; 9784BDF26405C951 CRC64;
MESPTSDFPT SDPADPRISD AVQAARLYYF QDQTMAAIGR DMGVSRSTVS RLITYARTSG
LVEIKISTPH GQAPRIEREF SERYGVRAHV VTVPELVGDL ERLEKVATFA GRLLASFFDS
DMVMGIAWGT TLSEVSKHLA PKRTYNSYVV QLNGAANTRT TGISYASDII RTIADAYGAL
PQGFPVPAFF DYPETREQLW RERSIKRVLD MQKRMDLAVF SIGVPGGNVP SHVYTAGYLE
PDEAEALRRD GVVGDIATVF FRSDGSYRGI ELNERASGPR LDLFEKVARR VCIVAGTAKL
PALEGALRGG LITDLIIDDV SATALVS
//