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Database: UniProt
Entry: A0A0D9QLT7_PLAFR
LinkDB: A0A0D9QLT7_PLAFR
Original site: A0A0D9QLT7_PLAFR 
ID   A0A0D9QLT7_PLAFR        Unreviewed;      1228 AA.
AC   A0A0D9QLT7;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   24-JAN-2024, entry version 39.
DE   RecName: Full=ATP-dependent helicase HrpA {ECO:0008006|Google:ProtNLM};
GN   ORFNames=AK88_03678 {ECO:0000313|EMBL:KJP86671.1};
OS   Plasmodium fragile.
OC   Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida;
OC   Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).
OX   NCBI_TaxID=5857 {ECO:0000313|EMBL:KJP86671.1, ECO:0000313|Proteomes:UP000054561};
RN   [1] {ECO:0000313|EMBL:KJP86671.1, ECO:0000313|Proteomes:UP000054561}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=nilgiri {ECO:0000313|Proteomes:UP000054561};
RG   The Broad Institute Genomics Platform;
RG   The Broad Institute Genome Sequencing Center for Infectious Disease;
RA   Neafsey D., Duraisingh M., Young S.K., Zeng Q., Gargeya S., Abouelleil A.,
RA   Alvarado L., Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A.,
RA   Gujja S., Hansen M., Howarth C., Imamovic A., Larimer J., Pearson M.,
RA   Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S., Wortman J.,
RA   Nusbaum C., Birren B.;
RT   "The Genome Sequence of Plasmodium fragile nilgiri.";
RL   Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; KQ001688; KJP86671.1; -; Genomic_DNA.
DR   RefSeq; XP_012336711.1; XM_012481288.1.
DR   AlphaFoldDB; A0A0D9QLT7; -.
DR   EnsemblProtists; KJP86671; KJP86671; AK88_03678.
DR   GeneID; 24268992; -.
DR   VEuPathDB; PlasmoDB:AK88_03678; -.
DR   OMA; DPMVAPE; -.
DR   OrthoDB; 3682876at2759; -.
DR   Proteomes; UP000054561; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR   GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR   CDD; cd05684; S1_DHX8_helicase; 1.
DR   CDD; cd18791; SF2_C_RHA; 1.
DR   Gene3D; 1.20.120.1080; -; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR048333; HA2_WH.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR003029; S1_domain.
DR   PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR   PANTHER; PTHR18934:SF85; ATP-DEPENDENT RNA HELICASE DHX8; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF21010; HA2_C; 1.
DR   Pfam; PF04408; HA2_N; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   Pfam; PF00575; S1; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW   mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242}.
FT   DOMAIN          254..329
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          579..742
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          765..941
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          74..102
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          134..246
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          329..363
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        161..179
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        180..195
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        196..246
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        346..363
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1228 AA;  141038 MW;  2C052777F0B34B53 CRC64;
     MECLSKINLI QKVNAELYKS LGVEDDNLAE YLIYLCKKAK SLEEFCKDVF ENGGEIEQSV
     LKYLYDIIKR PGGDSAGKAS GGKETRTDDD EQEEEDGVDK ENRLEVKMIE KKNEKMKGFH
     CLAIKNDEQL TRLSDGSGVE AGSDTATGSR GARPGKRSHH RDRSHSQDGS HTRDGGRHAH
     RDRDRHRHRG RSHSREGDRH VRDGDHHRDR DRHRDRDRHG ERRRDRSRSR SRSRDGDHKR
     RRREGVDSRA LRVNNIFTAT VSKIMDFGMF VSFRTIPEGY KEGLVHCTDI LPNRKRVTNM
     NEKFQKGMKV KVKVQAIFGE KIHLNMSEVD QKTGQNLVSD DEDDGDEGSA NRKGKEKDKN
     DMSIFDDLHE DYKELKKHNS DVFKEDPKDT IKYESVIKMQ SDYSKWEIQQ LIKSGIMHDE
     QIKQEYKNLR NDEKIEDEEE IIEIEVNERE PAFLKGQTTK AGAKLSPIQV IVNAEGSLAR
     AITTTSALAK ERKEQKQNEQ NAIYDSIPKD ISRPWEDPKP ELGERTIAEA LKNIGKNYDL
     PEWRKNYLHN NISIGVKNPM PVNEQREKLP IYNLKKDLMK AIAKNNVLIV IGETGSGKTT
     QIPQYLHEAN YTDKGIVGCT QPRRVAAMSI AKRVSEEFGC ILGQEVGYSI RFDDCTSNDT
     IIKYLTDGML LRETLSDTML SKYSFIILDE AHERTISTDI LFCLLKDVVK RRPDFKLIVT
     SATLDAEKFS TYFFNSPIFT IPGKIFPVEI LHSKEPESDY VEACLITVLN IHLNEHPGDI
     LVFLTGQDEI NTACEILHER MKKLESMSPP PLIILPIYSS LPSEMQSVIF DPAPQGCRKC
     VLATNIAEAS LTIDGIFFVI DPGFCKIRKY DSKRDMDSLV VAPISKANAK QRAGRAGRTG
     PGKCYRLYTE EAYKNEMAET SIPEIQRINL GSTVLLLKAL GVNDFLHFDF MDSPSVDTLI
     HSLENLYYLG ALDDNGYLTK LGKKMSNFPM EPNLSKILLT SINFNCADDV VTIVSMLSVQ
     NIFYRPQNKA LLADKKKNKF IMPQGDLITY LNIYNRWREN NYSNYWCHEN FIQSRALKRS
     QDVRKQILSI FERYNYEVEK NRSRNDSAKY VSICKSICSG YFNHVCKRDA QQGYNTLLTN
     QQVFIHPSST LFNKNPLFVV YHELVLTNKE YIRDCTIIQP QWLIQLAPNL FIPADEKKIS
     KIKLREKIEP LHNYYEEPNA WRLSRRKG
//
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